RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
LST1-208ENST00000376093 ZNF784Q8NCA9 323 aaPredicted RBP16.63■□□□□ 0.25
LST1-208ENST00000376093 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
LST1-208ENST00000376093 MYOM1P52179 1685 aa16.62■□□□□ 0.25
LST1-208ENST00000376093 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
LST1-208ENST00000376093 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
LST1-208ENST00000376093 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
LST1-208ENST00000376093 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
LST1-208ENST00000376093 TMF1P82094 1093 aa16.61■□□□□ 0.25
LST1-208ENST00000376093 KMT5BQ4FZB7 885 aa16.61■□□□□ 0.25
LST1-208ENST00000376093 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
LST1-208ENST00000376093 PCDHB3Q9Y5E6 796 aa16.61■□□□□ 0.25
LST1-208ENST00000376093 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
LST1-208ENST00000376093 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
LST1-208ENST00000376093 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
LST1-208ENST00000376093 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
LST1-208ENST00000376093 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
LST1-208ENST00000376093 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
LST1-208ENST00000376093 COPS2P61201 443 aa16.59■□□□□ 0.25
LST1-208ENST00000376093 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
LST1-208ENST00000376093 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
LST1-208ENST00000376093 BLOC1S3Q6QNY0 202 aa16.58■□□□□ 0.24
LST1-208ENST00000376093 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
LST1-208ENST00000376093 CHD4Q14839 1912 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 EXOC5O00471 708 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 PTF1AQ7RTS3 328 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 COG3Q96JB2 828 aa16.57■□□□□ 0.24
LST1-208ENST00000376093 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
LST1-208ENST00000376093 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
LST1-208ENST00000376093 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
LST1-208ENST00000376093 SULF1Q8IWU6 871 aa16.55■□□□□ 0.24
LST1-208ENST00000376093 NHSQ6T4R5 1651 aa16.55■□□□□ 0.24
LST1-208ENST00000376093 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 ZPR1O75312 459 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 RGS20O76081 388 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 FBLN1P23142 703 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 TMUB1Q9BVT8 246 aa16.54■□□□□ 0.24
LST1-208ENST00000376093 BCL9O00512 1426 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 IL2RBP14784 551 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 MDM2Q00987 491 aaPredicted RBP16.53■□□□□ 0.24
LST1-208ENST00000376093 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 IP6K1Q92551 441 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
LST1-208ENST00000376093 PLSCR1O15162 318 aa16.52■□□□□ 0.24
LST1-208ENST00000376093 AMPHP49418 695 aa16.52■□□□□ 0.24
LST1-208ENST00000376093 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
LST1-208ENST00000376093 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
LST1-208ENST00000376093 HOXC9P31274 260 aa16.51■□□□□ 0.23
LST1-208ENST00000376093 GCGRP47871 477 aa16.51■□□□□ 0.23
LST1-208ENST00000376093 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
LST1-208ENST00000376093 FYB1O15117 783 aa16.5■□□□□ 0.23
LST1-208ENST00000376093 CD46P15529 392 aa16.5■□□□□ 0.23
LST1-208ENST00000376093 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
LST1-208ENST00000376093 BTAF1O14981 1849 aa16.49■□□□□ 0.23
LST1-208ENST00000376093 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
LST1-208ENST00000376093 SYT17Q9BSW7 474 aa16.49■□□□□ 0.23
LST1-208ENST00000376093 NSD3Q9BZ95 1437 aa16.49■□□□□ 0.23
LST1-208ENST00000376093 UTRNP46939 3433 aa16.49■□□□□ 0.23
LST1-208ENST00000376093 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
LST1-208ENST00000376093 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
LST1-208ENST00000376093 KRI1Q8N9T8 703 aaKnown RBP16.47■□□□□ 0.23
LST1-208ENST00000376093 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
LST1-208ENST00000376093 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
LST1-208ENST00000376093 DOT1LQ8TEK3 1739 aa16.47■□□□□ 0.23
LST1-208ENST00000376093 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.23
LST1-208ENST00000376093 TLL1O43897 1013 aa16.46■□□□□ 0.23
LST1-208ENST00000376093 REPIN1Q9BWE0 567 aaKnown RBP16.46■□□□□ 0.23
LST1-208ENST00000376093 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
LST1-208ENST00000376093 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
LST1-208ENST00000376093 MEGF6O75095 1541 aa16.45■□□□□ 0.22
LST1-208ENST00000376093 FUT2Q10981 343 aa16.45■□□□□ 0.22
LST1-208ENST00000376093 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
LST1-208ENST00000376093 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
LST1-208ENST00000376093 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
LST1-208ENST00000376093 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
LST1-208ENST00000376093 CLCN1P35523 988 aa16.44■□□□□ 0.22
LST1-208ENST00000376093 AMHR2Q16671 573 aa16.44■□□□□ 0.22
LST1-208ENST00000376093 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
LST1-208ENST00000376093 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
LST1-208ENST00000376093 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
LST1-208ENST00000376093 SLC15A2Q16348 729 aa16.43■□□□□ 0.22
LST1-208ENST00000376093 MORN1Q5T089 497 aa16.43■□□□□ 0.22
LST1-208ENST00000376093 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
LST1-208ENST00000376093 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
LST1-208ENST00000376093 FLT4P35916 1363 aa16.41■□□□□ 0.22
LST1-208ENST00000376093 NR1I2O75469 434 aa16.41■□□□□ 0.22
LST1-208ENST00000376093 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
LST1-208ENST00000376093 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
LST1-208ENST00000376093 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
LST1-208ENST00000376093 INSRP06213 1382 aa16.4■□□□□ 0.22
LST1-208ENST00000376093 GIGYF1O75420 1035 aaPredicted RBP16.4■□□□□ 0.22
LST1-208ENST00000376093 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
LST1-208ENST00000376093 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
LST1-208ENST00000376093 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
LST1-208ENST00000376093 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms