RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
C9orf47-203ENST00000375851 RANBP6O60518 1105 aaKnown RBP15.94■□□□□ 0.14
C9orf47-203ENST00000375851 POLR3DP05423 398 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-203ENST00000375851 SSBP05455 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
C9orf47-203ENST00000375851 HSP90B2PQ58FF3 399 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 RUFY1Q96T51 708 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 GCP02774 474 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 C16orf71Q8IYS4 520 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-203ENST00000375851 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 GDPD2Q9HCC8 539 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 ACBD3Q9H3P7 528 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
C9orf47-203ENST00000375851 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 CTCFLQ8NI51 663 aaPredicted RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 GOLGA8BA8MQT2 603 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 CCDC183Q5T5S1 534 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 RNF41Q9H4P4 317 aaPredicted RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 SLC12A7Q9Y666 1083 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 ZFYVE9O95405 1425 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 BMP2KQ9NSY1 1161 aaPredicted RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 STX6O43752 255 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 ODF2Q5BJF6 829 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 LMBR1LQ6UX01 489 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
C9orf47-203ENST00000375851 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
C9orf47-203ENST00000375851 NPC1L1Q9UHC9 1359 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 HAND2P61296 217 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 TFIP11Q9UBB9 837 aaKnown RBP15.92■□□□□ 0.14
C9orf47-203ENST00000375851 GJB2P29033 226 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 SMTNL1A8MU46 457 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 TTF1Q15361 905 aaPredicted RBP15.92■□□□□ 0.14
C9orf47-203ENST00000375851 MTERF4Q7Z6M4 381 aaKnown RBP15.92■□□□□ 0.14
C9orf47-203ENST00000375851 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 BAG4O95429 457 aaKnown RBP15.92■□□□□ 0.14
C9orf47-203ENST00000375851 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 SMC5Q8IY18 1101 aa15.92■□□□□ 0.14
C9orf47-203ENST00000375851 ZFYVE27Q5T4F4 411 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 HMG20BQ9P0W2 317 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 TMX3Q96JJ7 454 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 ESYT1Q9BSJ8 1104 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 TMOD2Q9NZR1 351 aa15.91■□□□□ 0.14
C9orf47-203ENST00000375851 GOLGA8AA7E2F4 631 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 CCDC112Q8NEF3 446 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 TANGO6Q9C0B7 1094 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 USP16Q9Y5T5 823 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 HOXC9P31274 260 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 CFAP100Q494V2 611 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
C9orf47-203ENST00000375851 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
C9orf47-203ENST00000375851 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.14
C9orf47-203ENST00000375851 AK7Q96M32 723 aa15.89■□□□□ 0.14
C9orf47-203ENST00000375851 PA2G4Q9UQ80 394 aaKnown RBP15.89■□□□□ 0.14
C9orf47-203ENST00000375851 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
C9orf47-203ENST00000375851 ANO10Q9NW15 660 aa15.89■□□□□ 0.13
C9orf47-203ENST00000375851 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
C9orf47-203ENST00000375851 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
C9orf47-203ENST00000375851 MPHOSPH10O00566 681 aaKnown RBP15.89■□□□□ 0.13
C9orf47-203ENST00000375851 IP6K1Q92551 441 aa15.89■□□□□ 0.13
C9orf47-203ENST00000375851 CKAP2LQ8IYA6 745 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 CWF19L2Q2TBE0 894 aaKnown RBP15.88■□□□□ 0.13
C9orf47-203ENST00000375851 CRACR2BQ8N4Y2 399 aaPredicted RBP15.88■□□□□ 0.13
C9orf47-203ENST00000375851 TCEANC2Q96MN5 208 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 ORC3Q9UBD5 711 aaPredicted RBP15.88■□□□□ 0.13
C9orf47-203ENST00000375851 SEC63Q9UGP8 760 aaKnown RBP15.88■□□□□ 0.13
C9orf47-203ENST00000375851 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 PPFIA3O75145 1194 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 BRF1Q92994 677 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
C9orf47-203ENST00000375851 IL13P35225 146 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 ZNF76P36508 570 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
C9orf47-203ENST00000375851 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 TMEM132AQ24JP5 1023 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 RBM8AQ9Y5S9 174 aaKnown RBP15.87■□□□□ 0.13
C9orf47-203ENST00000375851 TRPM2O94759 1503 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 C6orf229H3BNL8 230 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 IL15P40933 162 aaPredicted RBP15.87■□□□□ 0.13
C9orf47-203ENST00000375851 ANAPC15P60006 121 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 SSRP1Q08945 709 aaKnown RBP15.87■□□□□ 0.13
C9orf47-203ENST00000375851 TMEM67Q5HYA8 995 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 MICU3Q86XE3 530 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 SYCP1Q15431 976 aa15.87■□□□□ 0.13
C9orf47-203ENST00000375851 LUC7LQ9NQ29 371 aaKnown RBP15.87■□□□□ 0.13
C9orf47-203ENST00000375851 CDR1P51861 262 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 CATIPQ7Z7H3 387 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 NECAB1Q8N987 351 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 ERCC4Q92889 916 aaPredicted RBP15.86■□□□□ 0.13
C9orf47-203ENST00000375851 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms