RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
C11orf88-202ENST00000375618 CARMIL3Q8ND23 1372 aa20.74■□□□□ 0.91
C11orf88-202ENST00000375618 SERPINB2P05120 415 aa20.74■□□□□ 0.91
C11orf88-202ENST00000375618 HDGFL1Q5TGJ6 251 aa20.74■□□□□ 0.91
C11orf88-202ENST00000375618 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
C11orf88-202ENST00000375618 FANCIQ9NVI1 1328 aa20.74■□□□□ 0.91
C11orf88-202ENST00000375618 DDX21Q9NR30 783 aaKnown RBP eCLIP20.73■□□□□ 0.91
C11orf88-202ENST00000375618 MAP3K15Q6ZN16 1313 aa20.73■□□□□ 0.91
C11orf88-202ENST00000375618 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
C11orf88-202ENST00000375618 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
C11orf88-202ENST00000375618 CLEC4GQ6UXB4 293 aa20.71■□□□□ 0.91
C11orf88-202ENST00000375618 CCDC24Q8N4L8 307 aa20.71■□□□□ 0.91
C11orf88-202ENST00000375618 XAGE3Q8WTP9 111 aa20.71■□□□□ 0.91
C11orf88-202ENST00000375618 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
C11orf88-202ENST00000375618 ERVV-1B6SEH8 477 aa20.7■□□□□ 0.9
C11orf88-202ENST00000375618 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
C11orf88-202ENST00000375618 COPS6Q7L5N1 327 aa20.7■□□□□ 0.9
C11orf88-202ENST00000375618 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
C11orf88-202ENST00000375618 AIMP1Q12904 312 aaKnown RBP20.69■□□□□ 0.9
C11orf88-202ENST00000375618 NUP98P52948 1817 aa20.69■□□□□ 0.9
C11orf88-202ENST00000375618 RGL2O15211 777 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 DPEP1P16444 411 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 KCNA3P22001 575 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 PRR5LQ6MZQ0 368 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 SETDB2Q96T68 719 aa20.68■□□□□ 0.9
C11orf88-202ENST00000375618 ANKRD31Q8N7Z5 1873 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
C11orf88-202ENST00000375618 CHRNA5P30532 468 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 TGFB2P61812 414 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
C11orf88-202ENST00000375618 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
C11orf88-202ENST00000375618 NIP7Q9Y221 180 aaKnown RBP eCLIP20.67■□□□□ 0.9
C11orf88-202ENST00000375618 ZNF652Q9Y2D9 606 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 ATP10DQ9P241 1426 aa20.67■□□□□ 0.9
C11orf88-202ENST00000375618 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
C11orf88-202ENST00000375618 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
C11orf88-202ENST00000375618 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
C11orf88-202ENST00000375618 PHAXQ9H814 394 aaKnown RBP20.66■□□□□ 0.9
C11orf88-202ENST00000375618 GPTP24298 496 aa20.65■□□□□ 0.9
C11orf88-202ENST00000375618 FAM177BA6PVY3 158 aa20.64■□□□□ 0.89
C11orf88-202ENST00000375618 GPR162Q16538 588 aa20.64■□□□□ 0.89
C11orf88-202ENST00000375618 ZNF34Q8IZ26 560 aa20.64■□□□□ 0.89
C11orf88-202ENST00000375618 CDCA7LQ96GN5 454 aa20.64■□□□□ 0.89
C11orf88-202ENST00000375618 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
C11orf88-202ENST00000375618 VAMP4O75379 141 aa20.63■□□□□ 0.89
C11orf88-202ENST00000375618 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
C11orf88-202ENST00000375618 CNBD1Q8NA66 436 aa20.63■□□□□ 0.89
C11orf88-202ENST00000375618 HYPKQ9NX55 129 aa20.63■□□□□ 0.89
C11orf88-202ENST00000375618 COL11A2P13942 1736 aaPredicted RBP20.62■□□□□ 0.89
C11orf88-202ENST00000375618 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
C11orf88-202ENST00000375618 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
C11orf88-202ENST00000375618 NBPF5PQ86XG9 351 aaPredicted RBP20.62■□□□□ 0.89
C11orf88-202ENST00000375618 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
C11orf88-202ENST00000375618 ABCC12Q96J65 1359 aa20.61■□□□□ 0.89
C11orf88-202ENST00000375618 PLBD2Q8NHP8 589 aa20.61■□□□□ 0.89
C11orf88-202ENST00000375618 ANKRD36CQ5JPF3 1778 aa20.6■□□□□ 0.89
C11orf88-202ENST00000375618 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
C11orf88-202ENST00000375618 G2E3Q7L622 706 aa20.6■□□□□ 0.89
C11orf88-202ENST00000375618 NUTM1Q86Y26 1132 aa20.6■□□□□ 0.89
C11orf88-202ENST00000375618 BRIP1Q9BX63 1249 aa20.6■□□□□ 0.89
C11orf88-202ENST00000375618 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
C11orf88-202ENST00000375618 GOLGB1Q14789 3259 aaKnown RBP20.59■□□□□ 0.89
C11orf88-202ENST00000375618 DLEC1Q9Y238 1755 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 NTSR2O95665 410 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 ANKRD13DQ6ZTN6 518 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 C2CD5Q86YS7 1000 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 ZNF428Q96B54 188 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 ARFGEF2Q9Y6D5 1785 aa20.59■□□□□ 0.89
C11orf88-202ENST00000375618 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
C11orf88-202ENST00000375618 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 E9PSI1 815 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 ST5P78524 1137 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 ERFEQ4G0M1 354 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 TPTE2Q6XPS3 522 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 NLRP10Q86W26 655 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 BCS1LQ9Y276 419 aa20.57■□□□□ 0.88
C11orf88-202ENST00000375618 IBTKQ9P2D0 1353 aaPredicted RBP20.57■□□□□ 0.88
C11orf88-202ENST00000375618 ATP5J2-PTCD1G3V325 749 aa20.56■□□□□ 0.88
C11orf88-202ENST00000375618 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
C11orf88-202ENST00000375618 ISCA1Q9BUE6 129 aa20.56■□□□□ 0.88
C11orf88-202ENST00000375618 PIM2Q9P1W9 311 aa20.56■□□□□ 0.88
C11orf88-202ENST00000375618 ADCY9O60503 1353 aa20.56■□□□□ 0.88
C11orf88-202ENST00000375618 NPHP1O15259 732 aa20.55■□□□□ 0.88
C11orf88-202ENST00000375618 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
C11orf88-202ENST00000375618 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
C11orf88-202ENST00000375618 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
C11orf88-202ENST00000375618 UTRNP46939 3433 aa20.55■□□□□ 0.88
C11orf88-202ENST00000375618 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
C11orf88-202ENST00000375618 SRGNP10124 158 aa20.54■□□□□ 0.88
C11orf88-202ENST00000375618 PDE6BP35913 854 aa20.54■□□□□ 0.88
C11orf88-202ENST00000375618 HSP90AB3PQ58FF7 597 aa20.54■□□□□ 0.88
C11orf88-202ENST00000375618 C3orf67Q6ZVT6 689 aa20.54■□□□□ 0.88
C11orf88-202ENST00000375618 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
C11orf88-202ENST00000375618 H0YIN7 160 aa20.53■□□□□ 0.88
C11orf88-202ENST00000375618 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
C11orf88-202ENST00000375618 NYXQ9GZU5 481 aa20.53■□□□□ 0.88
C11orf88-202ENST00000375618 GRIN3BO60391 1043 aa20.52■□□□□ 0.88
C11orf88-202ENST00000375618 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms