RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 TRAF5O00463 557 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 ESRRBO95718 433 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 CCDC30Q5VVM6 783 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 KRT74Q7RTS7 529 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 CCDC83Q8IWF9 413 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 PIBF1Q8WXW3 757 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 EFHD2Q96C19 240 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 NEK1Q96PY6 1258 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 TRIM17Q9Y577 477 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 ALDH3A1P30838 453 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 MIER1Q8N108 512 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 MRPL46Q9H2W6 279 aaKnown RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 NEDD9Q14511 834 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 ARL1P40616 181 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 MTIF2P46199 727 aaKnown RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 VPS36Q86VN1 386 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 CACYBPQ9HB71 228 aaKnown RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 ANKFY1Q9P2R3 1169 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 DTNBO60941 627 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 KCNA4P22459 653 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 SCHIP1Q9P0W5 487 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-202ENST00000375427 CTTNBP2NLQ9P2B4 639 aa6.83□□□□□ -1.32
SCN2A-202ENST00000375427 TSC22D1Q15714 1073 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 UBAP1Q9NZ09 502 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 DYNC1I2Q13409 638 aaKnown RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 INAQ16352 499 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 HSF2BPO75031 334 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 RILPL1Q5EBL4 403 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 B4GALNT4Q76KP1 1039 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 ZSCAN12O43309 604 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 ARMCX6Q7L4S7 300 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 NBPF11Q86T75 865 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 TMCO5AQ8N6Q1 288 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 DHX16O60231 1041 aaKnown RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 CARSP49589 748 aaKnown RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 CKAP4Q07065 602 aaKnown RBP6.82□□□□□ -1.32
SCN2A-202ENST00000375427 TRIM7Q9C029 511 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 PHEXP78562 749 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 LUZP2Q86TE4 346 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 RFWD2Q8NHY2 731 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 SIL1Q9H173 461 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 Q9H521 79 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 CCDC192P0DO97 292 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 NEK2P51955 445 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 BRD3Q15059 726 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 KRT222Q8N1A0 295 aa6.82□□□□□ -1.32
SCN2A-202ENST00000375427 A0A0B4J269 797 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 TNNC2P02585 160 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 TUBB3Q13509 450 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 RSPH14Q9UHP6 348 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 FRMD3A2A2Y4 597 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 SKILP12757 684 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 HOXC8P31273 242 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 PAFAH1B1P43034 410 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 SNX16P57768 344 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 LARSQ9P2J5 1176 aaKnown RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 NONOQ15233 471 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 SPAG9O60271 1321 aaKnown RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 MPP4Q96JB8 637 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 SYTL2Q9HCH5 934 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 BCAP29Q9UHQ4 241 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 FAN1Q9Y2M0 1017 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 TMED1Q13445 227 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 HDXQ7Z353 690 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 TTC12Q9H892 705 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 CTNNA2P26232 953 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 ST13P5Q8NFI4 369 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 SCOCQ9UIL1 159 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 ARIH1Q9Y4X5 557 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 CTAGE5O15320 804 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 HLTFQ14527 1009 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCN2A-202ENST00000375427 CEP85LQ5SZL2 805 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 ZSCAN32Q9NX65 697 aa6.81□□□□□ -1.32
SCN2A-202ENST00000375427 PPP1R21Q6ZMI0 780 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 CNTRLQ7Z7A1 2325 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 CCDC57Q2TAC2 916 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 CFAP157Q5JU67 520 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 ZFP91Q96JP5 570 aaPredicted RBP6.8□□□□□ -1.32
SCN2A-202ENST00000375427 UTP14AQ9BVJ6 771 aaKnown RBP6.8□□□□□ -1.32
SCN2A-202ENST00000375427 WDR46O15213 610 aaKnown RBP6.8□□□□□ -1.32
SCN2A-202ENST00000375427 RAB11FIP3O75154 756 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 SKIP12755 728 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 MX2P20592 715 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 SPA17Q15506 151 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 PPP4R3BQ5MIZ7 849 aa6.8□□□□□ -1.32
SCN2A-202ENST00000375427 RNF10Q8N5U6 811 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms