RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PRAMEF22A3QJZ6 481 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 ERVV-2B6SEH9 535 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 MCCP23508 829 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 OS9Q13438 667 aaPredicted RBP10.01□□□□□ -0.81
UBR4-202ENST00000375224 ZNF496Q96IT1 587 aaPredicted RBP10.01□□□□□ -0.81
UBR4-202ENST00000375224 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 RRAGDQ9NQL2 400 aaPredicted RBP10.01□□□□□ -0.81
UBR4-202ENST00000375224 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
UBR4-202ENST00000375224 C5P01031 1676 aa10□□□□□ -0.81
UBR4-202ENST00000375224 COL5A2P05997 1499 aaPredicted RBP10□□□□□ -0.81
UBR4-202ENST00000375224 AIMP1Q12904 312 aaKnown RBP10□□□□□ -0.81
UBR4-202ENST00000375224 IL2RBP14784 551 aa10□□□□□ -0.81
UBR4-202ENST00000375224 METTL22Q9BUU2 404 aaPredicted RBP10□□□□□ -0.81
UBR4-202ENST00000375224 NHSL1Q5SYE7 1610 aa10□□□□□ -0.81
UBR4-202ENST00000375224 TTC41PQ6P2S7 1318 aa10□□□□□ -0.81
UBR4-202ENST00000375224 ST18O60284 1047 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 EVA1CP58658 441 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 CLASRPQ8N2M8 674 aaKnown RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 GPATCH3Q96I76 525 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 ANKRD13DQ6ZTN6 518 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 XAGE3Q8WTP9 111 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 ESYT1Q9BSJ8 1104 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 IL1RAPL2Q9NP60 686 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 USP42Q9H9J4 1324 aaKnown RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 CWF19L2Q2TBE0 894 aaKnown RBP9.99□□□□□ -0.81
UBR4-202ENST00000375224 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
UBR4-202ENST00000375224 MYL6BP14649 208 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 CHMLP26374 656 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 CNTROBQ8N137 903 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 NEURL1BA8MQ27 555 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 GLRX3O76003 335 aaKnown RBP9.98□□□□□ -0.81
UBR4-202ENST00000375224 ANAPC15P60006 121 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■□□□□ 9.7
UBR4-202ENST00000375224 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 USP16Q9Y5T5 823 aa9.98□□□□□ -0.81
UBR4-202ENST00000375224 DDIT3P35638 169 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 PTMSP20962 102 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
UBR4-202ENST00000375224 GCKRQ14397 625 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 MCM2P49736 904 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 TSHZ3Q63HK5 1081 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 PI4K2BQ8TCG2 481 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 MYD88Q99836 296 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 COL15A1P39059 1388 aa9.97□□□□□ -0.81
UBR4-202ENST00000375224 TPM2P07951 284 aa9.96□□□□□ -0.81
UBR4-202ENST00000375224 IFIT2P09913 472 aaKnown RBP9.96□□□□□ -0.81
UBR4-202ENST00000375224 PLBD2Q8NHP8 589 aa9.96□□□□□ -0.81
UBR4-202ENST00000375224 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.81
UBR4-202ENST00000375224 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
UBR4-202ENST00000375224 MCM4P33991 863 aa9.96□□□□□ -0.82
UBR4-202ENST00000375224 LRP10Q7Z4F1 713 aa9.96□□□□□ -0.82
UBR4-202ENST00000375224 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.82
UBR4-202ENST00000375224 GBP4Q96PP9 640 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 ECHDC1Q9NTX5 307 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 PLCD3Q8N3E9 789 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 CWC22Q9HCG8 908 aaKnown RBP9.95□□□□□ -0.82
UBR4-202ENST00000375224 ANO2Q9NQ90 1003 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 UBR2Q8IWV8 1755 aa9.95□□□□□ -0.82
UBR4-202ENST00000375224 CD2BP2O95400 341 aaKnown RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 CLCN1P35523 988 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 IL17RAQ96F46 866 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 PAPPAQ13219 1627 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 ARFGEF2Q9Y6D5 1785 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
UBR4-202ENST00000375224 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 ZHX1Q9UKY1 873 aaPredicted RBP9.94□□□□□ -0.82
UBR4-202ENST00000375224 HIP1O00291 1037 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 NUCB2P80303 420 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 KIAA1211Q6ZU35 1233 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 UNC5CLQ8IV45 518 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 PA2G4Q9UQ80 394 aaKnown RBP9.93□□□□□ -0.82
UBR4-202ENST00000375224 GLI3P10071 1580 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 AACSQ86V21 672 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 COPRSQ9NQ92 184 aa9.93□□□□□ -0.82
UBR4-202ENST00000375224 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 SHANK3Q9BYB0 1731 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 COL14A1Q05707 1796 aaKnown RBP9.92□□□□□ -0.82
UBR4-202ENST00000375224 SGSM2O43147 1006 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 DIAPH3Q9NSV4 1193 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 TNS2Q63HR2 1409 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms