RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 CEP126Q9P2H0 1117 aa10.06□□□□□ -0.8
ABCA1-202ENST00000374736 DEUP1Q05D60 604 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 ARHGAP18Q8N392 663 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 PRM3Q9NNZ6 103 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 KRT72Q14CN4 511 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 TSC22D1Q15714 1073 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 BICD1Q96G01 975 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 STMN4Q9H169 189 aaPredicted RBP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 CCDC96Q2M329 555 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 CCDC148Q8NFR7 591 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 SMARCA5O60264 1052 aaPredicted RBP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 PPP4R4Q6NUP7 873 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 TMEM57Q8N5G2 664 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 KLHDC4Q8TBB5 520 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCA1-202ENST00000374736 IFT81Q8WYA0 676 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
ABCA1-202ENST00000374736 MARCH6O60337 910 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 PCK1P35558 622 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 GJA8P48165 433 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 SNCBQ16143 134 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 ATP6V0A1Q93050 837 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 GMEB1Q9Y692 573 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 EHBP1Q8NDI1 1231 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 RRP36Q96EU6 259 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 ESF1Q9H501 851 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 PRDM16Q9HAZ2 1276 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 TMCC1O94876 653 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 PSMD2Q13200 908 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 PSMD6Q15008 389 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 FOXD4L4Q8WXT5 416 aaPredicted RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 NAA15Q9BXJ9 866 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 ARIH1Q9Y4X5 557 aaPredicted RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 TMEM232C9JQI7 657 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 PRPF38AQ8NAV1 312 aaKnown RBP10.04□□□□□ -0.8
ABCA1-202ENST00000374736 EMC3Q9P0I2 261 aa10.04□□□□□ -0.8
ABCA1-202ENST00000374736 SLC30A9Q6PML9 568 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 TRIM7Q9C029 511 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 NDC80O14777 642 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 SMC1BQ8NDV3 1235 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 KCNA1Q09470 495 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■■■■■ 62.9
ABCA1-202ENST00000374736 DHX29Q7Z478 1369 aaKnown RBP10.03□□□□□ -0.8
ABCA1-202ENST00000374736 EXOC4Q96A65 974 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
ABCA1-202ENST00000374736 SERPINI2O75830 405 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 ALS2CR12Q96Q35 445 aa10.03□□□□□ -0.8
ABCA1-202ENST00000374736 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
ABCA1-202ENST00000374736 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
ABCA1-202ENST00000374736 CDC37Q16543 378 aaPredicted RBP10.03□□□□□ -0.8
ABCA1-202ENST00000374736 ICA1Q05084 483 aa10.02□□□□□ -0.8
ABCA1-202ENST00000374736 BIRC3Q13489 604 aa10.02□□□□□ -0.8
ABCA1-202ENST00000374736 LAMB3Q13751 1172 aa10.02□□□□□ -0.8
ABCA1-202ENST00000374736 VPS37AQ8NEZ2 397 aa10.02□□□□□ -0.8
ABCA1-202ENST00000374736 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.8
ABCA1-202ENST00000374736 ZNF483Q8TF39 744 aaPredicted RBP10.02□□□□□ -0.8
ABCA1-202ENST00000374736 ZNF148Q9UQR1 794 aa10.02□□□□□ -0.8
ABCA1-202ENST00000374736 DRC3Q9H069 523 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 RTF1Q92541 710 aaKnown RBP10.02□□□□□ -0.81
ABCA1-202ENST00000374736 KRT7P08729 469 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 MFSD4BQ5TF39 518 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 MYO1CO00159 1063 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 EIF2S1P05198 315 aaKnown RBP10.02□□□□□ -0.81
ABCA1-202ENST00000374736 CHUKO15111 745 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 CUL3Q13618 768 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 API5Q9BZZ5 524 aaKnown RBP10.02□□□□□ -0.81
ABCA1-202ENST00000374736 TMX1Q9H3N1 280 aa10.02□□□□□ -0.81
ABCA1-202ENST00000374736 SF3B3Q15393 1217 aaKnown RBP10.01□□□□□ -0.81
ABCA1-202ENST00000374736 TRAIPQ9BWF2 469 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 PIBF1Q8WXW3 757 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 CENPKQ9BS16 269 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 DYTNA2CJ06 578 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 NLRP9Q7RTR0 991 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 ENAHQ8N8S7 591 aaPredicted RBP10.01□□□□□ -0.81
ABCA1-202ENST00000374736 PALMDQ9NP74 551 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 RRAGDQ9NQL2 400 aaPredicted RBP10.01□□□□□ -0.81
ABCA1-202ENST00000374736 UBAP1Q9NZ09 502 aa10.01□□□□□ -0.81
ABCA1-202ENST00000374736 PLEKHH2Q8IVE3 1493 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms