RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
HMGCL-203ENST00000374490 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
HMGCL-203ENST00000374490 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
HMGCL-203ENST00000374490 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 NECTIN2Q92692 538 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 TEFQ10587 303 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 KLHL40Q2TBA0 621 aa16.99■□□□□ 0.31
HMGCL-203ENST00000374490 CHMLP26374 656 aa16.98■□□□□ 0.31
HMGCL-203ENST00000374490 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
HMGCL-203ENST00000374490 TRIM37O94972 964 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
HMGCL-203ENST00000374490 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
HMGCL-203ENST00000374490 BARGINQ6ZT62 677 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 LRP5O75197 1615 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
HMGCL-203ENST00000374490 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
HMGCL-203ENST00000374490 EZH2Q15910 746 aaKnown RBP16.96■□□□□ 0.31
HMGCL-203ENST00000374490 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
HMGCL-203ENST00000374490 BTBD11A6QL63 1104 aa16.96■□□□□ 0.3
HMGCL-203ENST00000374490 BEND3Q5T5X7 828 aa16.96■□□□□ 0.3
HMGCL-203ENST00000374490 ALDH1L1O75891 902 aa16.95■□□□□ 0.3
HMGCL-203ENST00000374490 APBA3O96018 575 aa16.95■□□□□ 0.3
HMGCL-203ENST00000374490 PPP1R42Q7Z4L9 355 aa16.95■□□□□ 0.3
HMGCL-203ENST00000374490 RILPL2Q969X0 211 aa16.95■□□□□ 0.3
HMGCL-203ENST00000374490 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
HMGCL-203ENST00000374490 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 RHPN1Q8TCX5 695 aa16.94■□□□□ 0.3
HMGCL-203ENST00000374490 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
HMGCL-203ENST00000374490 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
HMGCL-203ENST00000374490 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 COL5A2P05997 1499 aaPredicted RBP16.94■□□□□ 0.3
HMGCL-203ENST00000374490 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
HMGCL-203ENST00000374490 MTX1Q13505 466 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 INTS4Q96HW7 963 aaKnown RBP16.93■□□□□ 0.3
HMGCL-203ENST00000374490 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 ANO2Q9NQ90 1003 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
HMGCL-203ENST00000374490 MEGF6O75095 1541 aa16.93■□□□□ 0.3
HMGCL-203ENST00000374490 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
HMGCL-203ENST00000374490 NEK4P51957 841 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 CUL4AQ13619 759 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.3
HMGCL-203ENST00000374490 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
HMGCL-203ENST00000374490 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
HMGCL-203ENST00000374490 ERC1Q8IUD2 1116 aa16.91■□□□□ 0.3
HMGCL-203ENST00000374490 ADCY9O60503 1353 aa16.91■□□□□ 0.3
HMGCL-203ENST00000374490 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 ARXQ96QS3 562 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 PANK2Q9BZ23 570 aa16.9■□□□□ 0.3
HMGCL-203ENST00000374490 HSPA4P34932 840 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 ZNF445P59923 1031 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
HMGCL-203ENST00000374490 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
HMGCL-203ENST00000374490 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
HMGCL-203ENST00000374490 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
HMGCL-203ENST00000374490 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 GIGYF1O75420 1035 aaPredicted RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
HMGCL-203ENST00000374490 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
HMGCL-203ENST00000374490 IFNL2Q8IZJ0 200 aa16.88■□□□□ 0.29
HMGCL-203ENST00000374490 RAD50Q92878 1312 aa16.87■□□□□ 0.29
HMGCL-203ENST00000374490 SGSM2O43147 1006 aa16.87■□□□□ 0.29
HMGCL-203ENST00000374490 KCNQ3O43525 872 aa16.87■□□□□ 0.29
HMGCL-203ENST00000374490 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
HMGCL-203ENST00000374490 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
HMGCL-203ENST00000374490 ANP32BQ92688 251 aaKnown RBP16.87■□□□□ 0.29
HMGCL-203ENST00000374490 PHKG2P15735 406 aa16.86■□□□□ 0.29
HMGCL-203ENST00000374490 CCDC173Q0VFZ6 552 aa16.86■□□□□ 0.29
HMGCL-203ENST00000374490 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
HMGCL-203ENST00000374490 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
HMGCL-203ENST00000374490 CARD10Q9BWT7 1032 aa16.86■□□□□ 0.29
HMGCL-203ENST00000374490 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
HMGCL-203ENST00000374490 TNS1Q9HBL0 1735 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms