RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 EXOC6BQ9Y2D4 811 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 KANK1Q14678 1352 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 TRIM66O15016 1216 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 TUBBP07437 444 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 PNMA6AP0CW24 399 aaPredicted RBP11.85□□□□□ -0.51
CD28-202ENST00000374481 CYP2C19P33261 490 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
CD28-202ENST00000374481 ANAPC15P60006 121 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 FSIP1Q8NA03 581 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 EXOC4Q96A65 974 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 CXorf56Q9H5V9 222 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
CD28-202ENST00000374481 TUBB4BP68371 445 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 BIRC2Q13490 618 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 ZRSR2Q15696 482 aaKnown RBP11.85□□□□□ -0.51
CD28-202ENST00000374481 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 CCDC121Q6ZUS5 278 aa11.85□□□□□ -0.51
CD28-202ENST00000374481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
CD28-202ENST00000374481 A0A087WUV0 522 aaPredicted RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 CLCN6P51797 869 aa11.84□□□□□ -0.51
CD28-202ENST00000374481 CLASRPQ8N2M8 674 aaKnown RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 NDUFAB1O14561 156 aa11.84□□□□□ -0.51
CD28-202ENST00000374481 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
CD28-202ENST00000374481 RBBP5Q15291 538 aaKnown RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 ZNHIT6Q9NWK9 470 aaKnown RBP11.84□□□□□ -0.51
CD28-202ENST00000374481 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
CD28-202ENST00000374481 ZEB2O60315 1214 aa11.83□□□□□ -0.51
CD28-202ENST00000374481 GUCY2CP25092 1073 aa11.83□□□□□ -0.51
CD28-202ENST00000374481 PEX19P40855 299 aa11.83□□□□□ -0.51
CD28-202ENST00000374481 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.51
CD28-202ENST00000374481 GPR161Q8N6U8 529 aaKnown RBP11.83□□□□□ -0.51
CD28-202ENST00000374481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.51
CD28-202ENST00000374481 CAPN7Q9Y6W3 813 aa11.83□□□□□ -0.51
CD28-202ENST00000374481 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 SETSIPP0DME0 302 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 UBASH3AP57075 661 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 CTCFLQ8NI51 663 aaPredicted RBP11.83□□□□□ -0.52
CD28-202ENST00000374481 RABEP2Q9H5N1 569 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 PRKAR2BP31323 418 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 SUFUQ9UMX1 484 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 SLC3A2P08195 630 aaKnown RBP11.83□□□□□ -0.52
CD28-202ENST00000374481 NEDD9Q14511 834 aa11.83□□□□□ -0.52
CD28-202ENST00000374481 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.52
CD28-202ENST00000374481 TMCO5BA8MYB1 307 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
CD28-202ENST00000374481 CPLX3Q8WVH0 158 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 IL1RAPL2Q9NP60 686 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
CD28-202ENST00000374481 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
CD28-202ENST00000374481 SATB1Q01826 763 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 JPH2Q9BR39 696 aaPredicted RBP11.82□□□□□ -0.52
CD28-202ENST00000374481 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
CD28-202ENST00000374481 EIF3CLB5ME19 914 aaKnown RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 OPA1O60313 960 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 EIF3CQ99613 913 aaKnown RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 ARHGAP25P42331 645 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 TAX1BP1Q86VP1 789 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 HYPKQ9NX55 129 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 GOLGA6L10A0A0M3HER8 536 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 CHMP4BP1P59074 171 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 CEP85LQ5SZL2 805 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 NESP48681 1621 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 HIP1O00291 1037 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
CD28-202ENST00000374481 SRLQ86TD4 932 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 SIL1Q9H173 461 aa11.81□□□□□ -0.52
CD28-202ENST00000374481 CCDC175P0C221 793 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 LMOD1P29536 600 aaPredicted RBP11.8□□□□□ -0.52
CD28-202ENST00000374481 KARSQ15046 597 aaKnown RBP11.8□□□□□ -0.52
CD28-202ENST00000374481 SAFBQ15424 915 aaKnown RBP eCLIP11.8□□□□□ -0.52
CD28-202ENST00000374481 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
CD28-202ENST00000374481 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 HSF2BPO75031 334 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 GYS2P54840 703 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 ETF1P62495 437 aaKnown RBP11.8□□□□□ -0.52
CD28-202ENST00000374481 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms