RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
COL9A2-202ENST00000372748 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
COL9A2-202ENST00000372748 LETM1O95202 739 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-202ENST00000372748 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-202ENST00000372748 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-202ENST00000372748 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
COL9A2-202ENST00000372748 TTC14Q96N46 770 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 RAD50Q92878 1312 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 CCDC83Q8IWF9 413 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 SGSM2O43147 1006 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 FUCA2Q9BTY2 467 aa17.73■□□□□ 0.43
COL9A2-202ENST00000372748 ANXA1P04083 346 aa17.72■□□□□ 0.43
COL9A2-202ENST00000372748 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
COL9A2-202ENST00000372748 DMTNQ08495 405 aa17.72■□□□□ 0.43
COL9A2-202ENST00000372748 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
COL9A2-202ENST00000372748 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
COL9A2-202ENST00000372748 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
COL9A2-202ENST00000372748 RIOK3O14730 519 aaKnown RBP17.71■□□□□ 0.43
COL9A2-202ENST00000372748 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
COL9A2-202ENST00000372748 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
COL9A2-202ENST00000372748 GJB2P29033 226 aa17.71■□□□□ 0.43
COL9A2-202ENST00000372748 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.43
COL9A2-202ENST00000372748 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
COL9A2-202ENST00000372748 KCNQ3O43525 872 aa17.7■□□□□ 0.42
COL9A2-202ENST00000372748 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
COL9A2-202ENST00000372748 CAMK4Q16566 473 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 PDCL2Q8N4E4 241 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 NBPF7P0C2Y1 421 aaPredicted RBP17.69■□□□□ 0.42
COL9A2-202ENST00000372748 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
COL9A2-202ENST00000372748 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 ARHGAP23Q9P227 1491 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 SLIT1O75093 1534 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
COL9A2-202ENST00000372748 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
COL9A2-202ENST00000372748 FAM173BQ6P4H8 233 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
COL9A2-202ENST00000372748 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.422e-8■■■□□ 16.3
COL9A2-202ENST00000372748 FERMT3Q86UX7 667 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
COL9A2-202ENST00000372748 PTGS1P23219 599 aa17.67■□□□□ 0.42
COL9A2-202ENST00000372748 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
COL9A2-202ENST00000372748 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
COL9A2-202ENST00000372748 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
COL9A2-202ENST00000372748 IGSF3O75054 1194 aa17.67■□□□□ 0.42
COL9A2-202ENST00000372748 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
COL9A2-202ENST00000372748 AOX1Q06278 1338 aa17.67■□□□□ 0.42
COL9A2-202ENST00000372748 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
COL9A2-202ENST00000372748 LUZP1Q86V48 1076 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 CCDC192P0DO97 292 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 PTH1RQ03431 593 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
COL9A2-202ENST00000372748 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
COL9A2-202ENST00000372748 MPRIPQ6WCQ1 1025 aa17.65■□□□□ 0.42
COL9A2-202ENST00000372748 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
COL9A2-202ENST00000372748 FER1L4A9Z1Z3 1794 aa17.65■□□□□ 0.42
COL9A2-202ENST00000372748 EIF4A1P60842 406 aaKnown RBP17.65■□□□□ 0.42
COL9A2-202ENST00000372748 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
COL9A2-202ENST00000372748 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
COL9A2-202ENST00000372748 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
COL9A2-202ENST00000372748 LRMPQ12912 555 aa17.64■□□□□ 0.41
COL9A2-202ENST00000372748 LIG1P18858 919 aa17.64■□□□□ 0.41
COL9A2-202ENST00000372748 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
COL9A2-202ENST00000372748 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
COL9A2-202ENST00000372748 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
COL9A2-202ENST00000372748 GOLGA6L6A8MZA4 724 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 COL9A3Q14050 684 aaPredicted RBP17.63■□□□□ 0.41
COL9A2-202ENST00000372748 ME3Q16798 604 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 IP6K1Q92551 441 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 PSME1Q06323 249 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 KIF1BPQ96EK5 621 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 C16orf45Q96MC5 204 aaPredicted RBP17.63■□□□□ 0.41
COL9A2-202ENST00000372748 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
COL9A2-202ENST00000372748 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 TEFQ10587 303 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
COL9A2-202ENST00000372748 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 FAM200AQ8TCP9 573 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 POLA2Q14181 598 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 BEND3Q5T5X7 828 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms