RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TRIM27P14373 513 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 PNPLA7Q6ZV29 1317 aa20.28■□□□□ 0.84
C9orf78-201ENST00000372447 SSFA2P28290 1259 aa20.28■□□□□ 0.84
C9orf78-201ENST00000372447 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.84
C9orf78-201ENST00000372447 PDE4AP27815 886 aa20.27■□□□□ 0.84
C9orf78-201ENST00000372447 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
C9orf78-201ENST00000372447 R3HDM1Q15032 1099 aaKnown RBP20.27■□□□□ 0.84
C9orf78-201ENST00000372447 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
C9orf78-201ENST00000372447 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
C9orf78-201ENST00000372447 COL23A1Q86Y22 540 aaPredicted RBP20.26■□□□□ 0.83
C9orf78-201ENST00000372447 SLC4A2P04920 1241 aa20.26■□□□□ 0.83
C9orf78-201ENST00000372447 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
C9orf78-201ENST00000372447 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
C9orf78-201ENST00000372447 ADRA2BP18089 450 aa20.25■□□□□ 0.83
C9orf78-201ENST00000372447 BACH2Q9BYV9 841 aa20.25■□□□□ 0.83
C9orf78-201ENST00000372447 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
C9orf78-201ENST00000372447 COL15A1P39059 1388 aa20.25■□□□□ 0.83
C9orf78-201ENST00000372447 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
C9orf78-201ENST00000372447 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
C9orf78-201ENST00000372447 PHAXQ9H814 394 aaKnown RBP20.24■□□□□ 0.83
C9orf78-201ENST00000372447 HYPKQ9NX55 129 aa20.24■□□□□ 0.83
C9orf78-201ENST00000372447 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
C9orf78-201ENST00000372447 ARXQ96QS3 562 aa20.23■□□□□ 0.83
C9orf78-201ENST00000372447 TBC1D2BQ9UPU7 963 aa20.23■□□□□ 0.83
C9orf78-201ENST00000372447 PCDHB15Q9Y5E8 787 aa20.23■□□□□ 0.83
C9orf78-201ENST00000372447 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
C9orf78-201ENST00000372447 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
C9orf78-201ENST00000372447 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 A0A087WZG4 1122 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 RFC4P35249 363 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 G2E3Q7L622 706 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 DDX19BQ9UMR2 479 aa20.22■□□□□ 0.83
C9orf78-201ENST00000372447 MSH5O43196 834 aa20.21■□□□□ 0.83
C9orf78-201ENST00000372447 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
C9orf78-201ENST00000372447 ITPRIPQ8IWB1 547 aa20.21■□□□□ 0.83
C9orf78-201ENST00000372447 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
C9orf78-201ENST00000372447 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
C9orf78-201ENST00000372447 TMEM57Q8N5G2 664 aa20.2■□□□□ 0.82
C9orf78-201ENST00000372447 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
C9orf78-201ENST00000372447 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
C9orf78-201ENST00000372447 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
C9orf78-201ENST00000372447 USP42Q9H9J4 1324 aaKnown RBP20.19■□□□□ 0.82
C9orf78-201ENST00000372447 ZPR1O75312 459 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 CAMTA2O94983 1202 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 FLIIQ13045 1269 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 USPL1Q5W0Q7 1092 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 QSER1Q2KHR3 1735 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 RGS3P49796 1198 aa20.18■□□□□ 0.82
C9orf78-201ENST00000372447 KIF6Q6ZMV9 814 aa20.17■□□□□ 0.82
C9orf78-201ENST00000372447 ZBTB3Q9H5J0 574 aa20.17■□□□□ 0.82
C9orf78-201ENST00000372447 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
C9orf78-201ENST00000372447 GYS1P13807 737 aa20.16■□□□□ 0.82
C9orf78-201ENST00000372447 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
C9orf78-201ENST00000372447 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
C9orf78-201ENST00000372447 MAP3K15Q6ZN16 1313 aa20.16■□□□□ 0.82
C9orf78-201ENST00000372447 HLFQ16534 295 aa20.16■□□□□ 0.82
C9orf78-201ENST00000372447 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
C9orf78-201ENST00000372447 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
C9orf78-201ENST00000372447 PLBD2Q8NHP8 589 aa20.15■□□□□ 0.82
C9orf78-201ENST00000372447 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.81
C9orf78-201ENST00000372447 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
C9orf78-201ENST00000372447 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
C9orf78-201ENST00000372447 CACNA1FO60840 1977 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 ZBTB7AO95365 584 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
C9orf78-201ENST00000372447 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 CLEC4GQ6UXB4 293 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 GIGYF2Q6Y7W6 1299 aaKnown RBP20.13■□□□□ 0.81
C9orf78-201ENST00000372447 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
C9orf78-201ENST00000372447 ADCY9O60503 1353 aa20.12■□□□□ 0.81
C9orf78-201ENST00000372447 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
C9orf78-201ENST00000372447 NLGN1Q8N2Q7 840 aa20.11■□□□□ 0.81
C9orf78-201ENST00000372447 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
C9orf78-201ENST00000372447 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
C9orf78-201ENST00000372447 RGL2O15211 777 aa20.11■□□□□ 0.81
C9orf78-201ENST00000372447 API5Q9BZZ5 524 aaKnown RBP20.11■□□□□ 0.81
C9orf78-201ENST00000372447 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
C9orf78-201ENST00000372447 ABCC4O15439 1325 aa20.1■□□□□ 0.81
C9orf78-201ENST00000372447 PTPRCP08575 1304 aa20.1■□□□□ 0.81
C9orf78-201ENST00000372447 F6X3S4 739 aa20.1■□□□□ 0.81
C9orf78-201ENST00000372447 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
C9orf78-201ENST00000372447 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
C9orf78-201ENST00000372447 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
C9orf78-201ENST00000372447 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
C9orf78-201ENST00000372447 C8orf34Q49A92 452 aa20.09■□□□□ 0.81
C9orf78-201ENST00000372447 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
C9orf78-201ENST00000372447 TM4SF1P30408 202 aa20.08■□□□□ 0.81
C9orf78-201ENST00000372447 TCIRG1Q13488 830 aa20.08■□□□□ 0.81
C9orf78-201ENST00000372447 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
C9orf78-201ENST00000372447 SCN7AQ01118 1682 aa20.08■□□□□ 0.81
C9orf78-201ENST00000372447 BCORQ6W2J9 1755 aa20.08■□□□□ 0.81
C9orf78-201ENST00000372447 NFIXQ14938 502 aa20.08■□□□□ 0.8
C9orf78-201ENST00000372447 DNAAF4Q8WXU2 420 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms