RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
EXOSC1-202ENST00000370885 BRIP1Q9BX63 1249 aa14.49□□□□□ -0.09
EXOSC1-202ENST00000370885 GPBP1L1Q9HC44 474 aaPredicted RBP14.49□□□□□ -0.09
EXOSC1-202ENST00000370885 PDIA6Q15084 440 aa14.48□□□□□ -0.09
EXOSC1-202ENST00000370885 CLEC4GQ6UXB4 293 aa14.48□□□□□ -0.09
EXOSC1-202ENST00000370885 TTLL6Q8N841 843 aa14.48□□□□□ -0.09
EXOSC1-202ENST00000370885 TSPYL4Q9UJ04 414 aa14.48□□□□□ -0.09
EXOSC1-202ENST00000370885 SLX4Q8IY92 1834 aa14.48□□□□□ -0.09
EXOSC1-202ENST00000370885 H0YIN7 160 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 MYL6BP14649 208 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 PROSER3Q2NL68 480 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 CNBD1Q8NA66 436 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 NUP98P52948 1817 aa14.47□□□□□ -0.09
EXOSC1-202ENST00000370885 FAM177BA6PVY3 158 aa14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 NFKBIEO00221 500 aa14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 ANXA1P04083 346 aa14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 SRGNP10124 158 aa14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 ZNF622Q969S3 477 aaKnown RBP eCLIP14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 NMRK2Q9NPI5 230 aa14.46□□□□□ -0.09
EXOSC1-202ENST00000370885 CACNA1SQ13698 1873 aa14.46□□□□□ -0.1
EXOSC1-202ENST00000370885 CCDC88AQ3V6T2 1871 aa14.46□□□□□ -0.1
EXOSC1-202ENST00000370885 CHL1O00533 1208 aa14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 PDE6BP35913 854 aa14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 RNF181Q9P0P0 153 aa14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 NIP7Q9Y221 180 aaKnown RBP eCLIP14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 TNRC6CQ9HCJ0 1690 aaKnown RBP14.45□□□□□ -0.1
EXOSC1-202ENST00000370885 MAP3K15Q6ZN16 1313 aa14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 SENP3-EIF4A1A0A087X0R7 540 aa14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 C21orf2O43822 256 aa14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 EIF2S2P20042 333 aaKnown RBP14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 NBPF5PQ86XG9 351 aaPredicted RBP14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 FER1L6Q2WGJ9 1857 aa14.44□□□□□ -0.1
EXOSC1-202ENST00000370885 UBN2Q6ZU65 1347 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 KLRG2A4D1S0 409 aaPredicted RBP14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 ERVV-1B6SEH8 477 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 RGL2O15211 777 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 ZBTB3Q9H5J0 574 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
EXOSC1-202ENST00000370885 ST5P78524 1137 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 OLFM4Q6UX06 510 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 SLC51AQ86UW1 340 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 NUTM1Q86Y26 1132 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 C7orf43Q8WVR3 580 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 ZNF652Q9Y2D9 606 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 ARFGEF2Q9Y6D5 1785 aa14.42□□□□□ -0.1
EXOSC1-202ENST00000370885 APAF1O14727 1248 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 GPTP24298 496 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 LMOD3Q0VAK6 560 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 SUSD4Q5VX71 490 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 PRPF40BQ6NWY9 871 aaKnown RBP14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 LAS1LQ9Y4W2 734 aaKnown RBP14.41□□□□□ -0.1
EXOSC1-202ENST00000370885 ZNF853P0CG23 659 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 LMNB1P20700 586 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 ERFEQ4G0M1 354 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 C3orf67Q6ZVT6 689 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 MASTLQ96GX5 879 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
EXOSC1-202ENST00000370885 TIAM2Q8IVF5 1701 aa14.39□□□□□ -0.11
EXOSC1-202ENST00000370885 NPHP1O15259 732 aa14.39□□□□□ -0.11
EXOSC1-202ENST00000370885 GIGYF2Q6Y7W6 1299 aaKnown RBP14.39□□□□□ -0.11
EXOSC1-202ENST00000370885 NTSR2O95665 410 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 KIF6Q6ZMV9 814 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 COPS6Q7L5N1 327 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 XAGE3Q8WTP9 111 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 RRAGCQ9HB90 399 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 MBIPQ9NS73 344 aa14.38□□□□□ -0.11
EXOSC1-202ENST00000370885 DICER1Q9UPY3 1922 aaKnown RBP14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 POTECB2RU33 542 aa14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 NPR1P16066 1061 aa14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 CRY2Q49AN0 593 aa14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 SYNE4Q8N205 404 aa14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
EXOSC1-202ENST00000370885 SNED1Q8TER0 1413 aa14.36□□□□□ -0.11
EXOSC1-202ENST00000370885 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
EXOSC1-202ENST00000370885 ZNF428Q96B54 188 aa14.36□□□□□ -0.11
EXOSC1-202ENST00000370885 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
EXOSC1-202ENST00000370885 CHPF2Q9P2E5 772 aa14.36□□□□□ -0.11
EXOSC1-202ENST00000370885 HSPA6P17066 643 aa14.35□□□□□ -0.11
EXOSC1-202ENST00000370885 LTBP3Q9NS15 1303 aa14.35□□□□□ -0.11
EXOSC1-202ENST00000370885 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 ANKRD36CQ5JPF3 1778 aa14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 TOMM70O94826 608 aa14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 TAOK3Q9H2K8 898 aa14.34□□□□□ -0.11
EXOSC1-202ENST00000370885 GTF2E1P29083 439 aaPredicted RBP14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 NYXQ9GZU5 481 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms