RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 TRIM35Q9UPQ4 493 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 UBR3Q6ZT12 1888 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 ADAMTS7Q9UKP4 1686 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 PSDA5PKW4 1024 aaPredicted RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 HSP90B1P14625 803 aaKnown RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 PTGER2P43116 358 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 MTERF4Q7Z6M4 381 aaKnown RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 NME9Q86XW9 330 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 JARID2Q92833 1246 aaPredicted RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 PRKRIP1Q9H875 184 aaPredicted RBP5.58□□□□□ -1.52
CDR1-201ENST00000370532 KNSTRNQ9Y448 316 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 TOGARAM1Q9Y4F4 1720 aa5.58□□□□□ -1.52
CDR1-201ENST00000370532 C4BP0C0L5 1744 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 COL5A3P25940 1745 aaPredicted RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 MLLT3P42568 568 aaPredicted RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 FAM193AP78312 1265 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 C8orf34Q49A92 452 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 ZCRB1Q8TBF4 217 aaKnown RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 MRS2Q9HD23 443 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 NLRP2Q9NX02 1062 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 PPP1R1BQ9UD71 204 aaPredicted RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 MEGF6O75095 1541 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 NPC1L1Q9UHC9 1359 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 PATL2C9JE40 543 aaKnown RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 TATP17735 454 aaPredicted RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 POLD1P28340 1107 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 ATN1P54259 1190 aaPredicted RBP5.57□□□□□ -1.52
CDR1-201ENST00000370532 EP400NLQ6ZTU2 488 aa5.57□□□□□ -1.52
CDR1-201ENST00000370532 DYNC1I1O14576 645 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 HSP90AB1P08238 724 aaKnown RBP5.56□□□□□ -1.52
CDR1-201ENST00000370532 KCNJ4P48050 445 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 TAF3Q5VWG9 929 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 FAM43BQ6ZT52 329 aaPredicted RBP5.56□□□□□ -1.52
CDR1-201ENST00000370532 CARD14Q9BXL6 1004 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 CRISPLD2Q9H0B8 497 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 FYB1O15117 783 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 APPP05067 770 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 AMPHP49418 695 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 CC2D1BQ5T0F9 858 aaKnown RBP5.56□□□□□ -1.52
CDR1-201ENST00000370532 ZSCAN30Q86W11 494 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 RAPGEF4Q8WZA2 1011 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 ANTXR1Q9H6X2 564 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 CD2APQ9Y5K6 639 aa5.56□□□□□ -1.52
CDR1-201ENST00000370532 HAX1O00165 279 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 CLGNO14967 610 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 GRIN3BO60391 1043 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 RRP1P56182 461 aaKnown RBP5.55□□□□□ -1.52
CDR1-201ENST00000370532 SLC20A2Q08357 652 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 RALBP1Q15311 655 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 PDCD7Q8N8D1 485 aaKnown RBP5.55□□□□□ -1.52
CDR1-201ENST00000370532 EMILIN3Q9NT22 766 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 SPG7Q9UQ90 795 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 MRC1P22897 1456 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 E2F4Q16254 413 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 TMEM92Q6UXU6 159 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 TSC1Q92574 1164 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 SCN11AQ9UI33 1791 aa5.55□□□□□ -1.52
CDR1-201ENST00000370532 CAPN2P17655 700 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 SSFA2P28290 1259 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 RC3H1Q5TC82 1133 aaKnown RBP5.54□□□□□ -1.52
CDR1-201ENST00000370532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDR1-201ENST00000370532 DNAJC2Q99543 621 aaKnown RBP5.54□□□□□ -1.52
CDR1-201ENST00000370532 WDR70Q9NW82 654 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 C10orf71Q711Q0 1435 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 ARFGEF1Q9Y6D6 1849 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 TRIM6-TRIM34B2RNG4 842 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 ERVV-2B6SEH9 535 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 TRAK2O60296 914 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 MCM4P33991 863 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 FAM161AQ3B820 660 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 AMOTQ4VCS5 1084 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 FAM182BQ5T319 152 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 TRIM34Q9BYJ4 488 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 PNPLA7Q6ZV29 1317 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 KDRP35968 1356 aa5.54□□□□□ -1.52
CDR1-201ENST00000370532 YY1P25490 414 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 GRIPAP1Q4V328 841 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 RBM26Q5T8P6 1007 aaKnown RBP5.53□□□□□ -1.52
CDR1-201ENST00000370532 COLQQ9Y215 455 aaPredicted RBP5.53□□□□□ -1.52
CDR1-201ENST00000370532 KIAA1551Q9HCM1 1747 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 LOC102724159A0A0B4J2E5 919 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
CDR1-201ENST00000370532 DSG2Q14126 1118 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 PWP2Q15269 919 aaKnown RBP5.53□□□□□ -1.52
CDR1-201ENST00000370532 SYT17Q9BSW7 474 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.53□□□□□ -1.52
CDR1-201ENST00000370532 IGSF1Q8N6C5 1336 aa5.53□□□□□ -1.52
CDR1-201ENST00000370532 MYBBP1AQ9BQG0 1328 aaKnown RBP5.52□□□□□ -1.53
CDR1-201ENST00000370532 CNTNAP4Q9C0A0 1308 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 PALLDQ8WX93 1383 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 UBR2Q8IWV8 1755 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 VIRMAQ69YN4 1812 aaKnown RBP5.52□□□□□ -1.53
CDR1-201ENST00000370532 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 POTEFA5A3E0 1075 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 ADCY9O60503 1353 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 C4AP0C0L4 1744 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms