RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 EVI5LQ96CN4 794 aa16.02■□□□□ 0.16
HIPK1-205ENST00000369558 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.16
HIPK1-205ENST00000369558 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.15
HIPK1-205ENST00000369558 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.15
HIPK1-205ENST00000369558 AEBP2Q6ZN18 517 aaPredicted RBP16.02■□□□□ 0.15
HIPK1-205ENST00000369558 ITSN2Q9NZM3 1697 aa16.02■□□□□ 0.15
HIPK1-205ENST00000369558 TMC6Q7Z403 805 aa16.02■□□□□ 0.15
HIPK1-205ENST00000369558 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.15
HIPK1-205ENST00000369558 TMCO3Q6UWJ1 677 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 DZIP1Q86YF9 867 aaKnown RBP16.01■□□□□ 0.15
HIPK1-205ENST00000369558 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
HIPK1-205ENST00000369558 TMX3Q96JJ7 454 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 TRERF1Q96PN7 1200 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
HIPK1-205ENST00000369558 ZNF165P49910 485 aa16■□□□□ 0.15
HIPK1-205ENST00000369558 PTPRKQ15262 1439 aa16■□□□□ 0.15
HIPK1-205ENST00000369558 GRIN2AQ12879 1464 aa16■□□□□ 0.15
HIPK1-205ENST00000369558 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
HIPK1-205ENST00000369558 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
HIPK1-205ENST00000369558 KIF5CO60282 957 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 ZPR1O75312 459 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 RLBP1P12271 317 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 WWC2Q6AWC2 1192 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 HMGB1P09429 215 aaKnown RBP15.99■□□□□ 0.15
HIPK1-205ENST00000369558 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
HIPK1-205ENST00000369558 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 CRACR2AQ9BSW2 395 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 ACEP12821 1306 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 IQCEQ6IPM2 695 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
HIPK1-205ENST00000369558 SEC24BO95487 1268 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 PRKCSHP14314 528 aaPredicted RBP15.98■□□□□ 0.15
HIPK1-205ENST00000369558 UBE2HP62256 183 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 PDIA4P13667 645 aaKnown RBP15.98■□□□□ 0.15
HIPK1-205ENST00000369558 SPA17Q15506 151 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 CHRNA2Q15822 529 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
HIPK1-205ENST00000369558 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 TMEM67Q5HYA8 995 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 LDHAL6AQ6ZMR3 332 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
HIPK1-205ENST00000369558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.97■□□□□ 0.15
HIPK1-205ENST00000369558 FANCAO15360 1455 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 NLRP5P59047 1200 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 ZSCAN12O43309 604 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 CHMP4BP1P59074 171 aa15.97■□□□□ 0.15
HIPK1-205ENST00000369558 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
HIPK1-205ENST00000369558 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 CRACR2BQ8N4Y2 399 aaPredicted RBP15.96■□□□□ 0.15
HIPK1-205ENST00000369558 SLC5A1P13866 664 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 TAF4BQ92750 862 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 STX1AQ16623 288 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 USP48Q86UV5 1035 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 TXLNBQ8N3L3 684 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 SLC26A6Q9BXS9 759 aa15.96■□□□□ 0.15
HIPK1-205ENST00000369558 CHST3Q7LGC8 479 aa15.96■□□□□ 0.14
HIPK1-205ENST00000369558 C14orf93Q9H972 538 aaKnown RBP15.96■□□□□ 0.14
HIPK1-205ENST00000369558 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.14
HIPK1-205ENST00000369558 CCDC96Q2M329 555 aa15.96■□□□□ 0.14
HIPK1-205ENST00000369558 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.14
HIPK1-205ENST00000369558 XRCC6P12956 609 aaKnown RBP eCLIP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 ORC3Q9UBD5 711 aaPredicted RBP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 IQSEC3Q9UPP2 1182 aaPredicted RBP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
HIPK1-205ENST00000369558 RHPN1Q8TCX5 695 aa15.95■□□□□ 0.14
HIPK1-205ENST00000369558 PDE1AP54750 535 aa15.95■□□□□ 0.14
HIPK1-205ENST00000369558 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
HIPK1-205ENST00000369558 CWC25Q9NXE8 425 aaPredicted RBP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 BCCIPQ9P287 314 aaKnown RBP eCLIP15.95■□□□□ 0.14
HIPK1-205ENST00000369558 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
HIPK1-205ENST00000369558 METAP2P50579 478 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■■■□□ 17.1
HIPK1-205ENST00000369558 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
HIPK1-205ENST00000369558 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
HIPK1-205ENST00000369558 BRF1Q92994 677 aa15.94■□□□□ 0.14
HIPK1-205ENST00000369558 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
HIPK1-205ENST00000369558 CTAGE5O15320 804 aa15.94■□□□□ 0.14
HIPK1-205ENST00000369558 TDRD12Q587J7 1177 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms