RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NARFQ9UHQ1 456 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 RNF123Q5XPI4 1314 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
CSDE1-204ENST00000369530 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-204ENST00000369530 PRDM4Q9UKN5 801 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 ANP32AP39687 249 aaKnown RBP8.91□□□□□ -0.98
CSDE1-204ENST00000369530 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
CSDE1-204ENST00000369530 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-204ENST00000369530 ABCC12Q96J65 1359 aa8.9□□□□□ -0.98
CSDE1-204ENST00000369530 KCNQ4P56696 695 aa8.9□□□□□ -0.98
CSDE1-204ENST00000369530 SLC10A5Q5PT55 438 aa8.9□□□□□ -0.98
CSDE1-204ENST00000369530 KAT6BQ8WYB5 2073 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 SSC5DA1L4H1 1573 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 ZNF530Q6P9A1 599 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-204ENST00000369530 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 CCNL1Q9UK58 526 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-204ENST00000369530 SMIM5Q71RC9 77 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 NLGN2Q8NFZ4 835 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 HMOX1P09601 288 aa8.89□□□□□ -0.99
CSDE1-204ENST00000369530 ERVV-1B6SEH8 477 aa8.88□□□□□ -0.99
CSDE1-204ENST00000369530 FLAD1Q8NFF5 587 aa8.88□□□□□ -0.99
CSDE1-204ENST00000369530 RUNDC1Q96C34 613 aa8.88□□□□□ -0.99
CSDE1-204ENST00000369530 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
CSDE1-204ENST00000369530 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
CSDE1-204ENST00000369530 TRIM28Q13263 835 aaKnown RBP8.87□□□□□ -0.99
CSDE1-204ENST00000369530 CLEC4GQ6UXB4 293 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 CFAP44Q96MT7 982 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 PTPRFP10586 1907 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 MYH7P12883 1935 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 NTSR2O95665 410 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
CSDE1-204ENST00000369530 PSDA5PKW4 1024 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 HOXA10P31260 410 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 TAF7LQ5H9L4 462 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 DNAJC10Q8IXB1 793 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 ISCA1Q9BUE6 129 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 POTECB2RU33 542 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 FAM9BQ8IZU0 186 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 LTV1Q96GA3 475 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 ARXQ96QS3 562 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 BRCA2P51587 3418 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 NEFMP07197 916 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 TGFB2P61812 414 aa8.86□□□□□ -0.99
CSDE1-204ENST00000369530 TAF7Q15545 349 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 RTFDC1Q9BY42 306 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-204ENST00000369530 SOX12O15370 315 aa8.85□□□□□ -0.99
CSDE1-204ENST00000369530 A0A0G2JMZ2 1700 aa8.85□□□□□ -0.99
CSDE1-204ENST00000369530 SENP3-EIF4A1A0A087X0R7 540 aa8.85□□□□□ -0.99
CSDE1-204ENST00000369530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.85□□□□□ -0.99
CSDE1-204ENST00000369530 MCM10Q7L590 875 aa8.85□□□□□ -0.99
CSDE1-204ENST00000369530 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
CSDE1-204ENST00000369530 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
CSDE1-204ENST00000369530 HNRNPUQ00839 825 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSDE1-204ENST00000369530 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
CSDE1-204ENST00000369530 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-204ENST00000369530 HAP1P54257 671 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-204ENST00000369530 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-204ENST00000369530 MBIPQ9NS73 344 aa8.84□□□□□ -0.99
CSDE1-204ENST00000369530 SLC39A6Q13433 755 aa8.84□□□□□ -1
CSDE1-204ENST00000369530 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 DCTN1Q14203 1278 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 NFIXQ14938 502 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 WDR63Q8IWG1 891 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
CSDE1-204ENST00000369530 SPON1Q9HCB6 807 aa8.83□□□□□ -1
CSDE1-204ENST00000369530 MRS2Q9HD23 443 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 HLFQ16534 295 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 C3orf67Q6ZVT6 689 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 SLC51AQ86UW1 340 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 PLA2G12BQ9BX93 195 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 STK32BQ9NY57 414 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
CSDE1-204ENST00000369530 ATP6V1AP38606 617 aa8.82□□□□□ -1
CSDE1-204ENST00000369530 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 NGEFQ8N5V2 710 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 PLXNB2O15031 1838 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
CSDE1-204ENST00000369530 TEX13AQ9BXU3 409 aaPredicted RBP8.81□□□□□ -1
CSDE1-204ENST00000369530 SRP68Q9UHB9 627 aaKnown RBP8.81□□□□□ -1
CSDE1-204ENST00000369530 LAMA4Q16363 1823 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 CLCN1P35523 988 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 KAZALD1Q96I82 304 aa8.81□□□□□ -1
CSDE1-204ENST00000369530 RLFQ13129 1914 aa8.8□□□□□ -1
CSDE1-204ENST00000369530 CABP4P57796 275 aa8.8□□□□□ -1
CSDE1-204ENST00000369530 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
CSDE1-204ENST00000369530 CCDC9Q9Y3X0 531 aaKnown RBP8.8□□□□□ -1
CSDE1-204ENST00000369530 VAMP4O75379 141 aa8.8□□□□□ -1
CSDE1-204ENST00000369530 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
CSDE1-204ENST00000369530 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
CSDE1-204ENST00000369530 SRGNP10124 158 aa8.79□□□□□ -1
CSDE1-204ENST00000369530 CDHR2Q9BYE9 1310 aa8.79□□□□□ -1
CSDE1-204ENST00000369530 NFKBIEO00221 500 aa8.79□□□□□ -1
CSDE1-204ENST00000369530 C8orf58Q8NAV2 365 aa8.79□□□□□ -1
CSDE1-204ENST00000369530 MS4A1P11836 297 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms