RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0
LINC01561-201ENST00000369071 MTMR6Q9Y217 621 aa15.08■□□□□ 0
LINC01561-201ENST00000369071 AMOTL2Q9Y2J4 779 aa15.08■□□□□ 0
LINC01561-201ENST00000369071 CEMIPQ8WUJ3 1361 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
LINC01561-201ENST00000369071 HSP90AB4PQ58FF6 505 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 VPS53Q5VIR6 699 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 GJB2P29033 226 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 PTH1RQ03431 593 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 DNAAF4Q8WXU2 420 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 TM6SF1Q9BZW5 370 aa15.07■□□□□ 0
LINC01561-201ENST00000369071 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
LINC01561-201ENST00000369071 USP54Q70EL1 1684 aa15.06■□□□□ 0
LINC01561-201ENST00000369071 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
LINC01561-201ENST00000369071 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
LINC01561-201ENST00000369071 DNTTIP2Q5QJE6 756 aaKnown RBP15.06■□□□□ 0
LINC01561-201ENST00000369071 GIMAP6Q6P9H5 292 aa15.06■□□□□ 0
LINC01561-201ENST00000369071 CCDC83Q8IWF9 413 aa15.06■□□□□ 0
LINC01561-201ENST00000369071 ZSCAN31Q96LW9 406 aaPredicted RBP15.06■□□□□ 0
LINC01561-201ENST00000369071 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
LINC01561-201ENST00000369071 LMTK3Q96Q04 1460 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 HOXB7P09629 217 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ 0
LINC01561-201ENST00000369071 GTF2F1P35269 517 aaKnown RBP eCLIP15.05■□□□□ 0
LINC01561-201ENST00000369071 HMGN5P82970 282 aaKnown RBP15.05■□□□□ 0
LINC01561-201ENST00000369071 DNM1Q05193 864 aaKnown RBP15.05■□□□□ 0
LINC01561-201ENST00000369071 ST3GAL1Q11201 340 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 TPRNQ4KMQ1 711 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 RUFY2Q8WXA3 655 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 SH2B1Q9NRF2 756 aaPredicted RBP15.05■□□□□ 0
LINC01561-201ENST00000369071 PDRG1Q9NUG6 133 aa15.05■□□□□ 0
LINC01561-201ENST00000369071 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 AP5Z1O43299 807 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 MTX1Q13505 466 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 C17orf53Q8N3J3 647 aaPredicted RBP15.05■□□□□ -0
LINC01561-201ENST00000369071 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ -0
LINC01561-201ENST00000369071 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 CHPF2Q9P2E5 772 aa15.05■□□□□ -0
LINC01561-201ENST00000369071 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
LINC01561-201ENST00000369071 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
LINC01561-201ENST00000369071 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
LINC01561-201ENST00000369071 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
LINC01561-201ENST00000369071 ADCY9O60503 1353 aa15.04■□□□□ -0
LINC01561-201ENST00000369071 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
LINC01561-201ENST00000369071 ZBTB7CA1YPR0 619 aa15.03■□□□□ -0
LINC01561-201ENST00000369071 NECTIN1Q15223 517 aa15.03■□□□□ -0
LINC01561-201ENST00000369071 USHBP1Q8N6Y0 703 aa15.03■□□□□ -0
LINC01561-201ENST00000369071 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
LINC01561-201ENST00000369071 ECHDC1Q9NTX5 307 aa15.03■□□□□ -0
LINC01561-201ENST00000369071 DTNBO60941 627 aa15.02■□□□□ -0
LINC01561-201ENST00000369071 ME3Q16798 604 aa15.02■□□□□ -0
LINC01561-201ENST00000369071 CLASRPQ8N2M8 674 aaKnown RBP15.02■□□□□ -0
LINC01561-201ENST00000369071 TBX22Q9Y458 520 aa15.02■□□□□ -0
LINC01561-201ENST00000369071 OS9Q13438 667 aaPredicted RBP15.02□□□□□ -0.01
LINC01561-201ENST00000369071 ZNF710Q8N1W2 664 aa15.02□□□□□ -0.01
LINC01561-201ENST00000369071 LGR6Q9HBX8 967 aa15.02□□□□□ -0.01
LINC01561-201ENST00000369071 ANKARQ7Z5J8 1434 aa15.02□□□□□ -0.01
LINC01561-201ENST00000369071 KIAA1524Q8TCG1 905 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 KCNQ3O43525 872 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 CCDC94Q9BW85 323 aaPredicted RBP15.01□□□□□ -0.01
LINC01561-201ENST00000369071 CHMP4AQ9BY43 222 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
LINC01561-201ENST00000369071 CHD2O14647 1828 aaKnown RBP15□□□□□ -0.01
LINC01561-201ENST00000369071 VPS37CA5D8V6 355 aaPredicted RBP15□□□□□ -0.01
LINC01561-201ENST00000369071 ANXA1P04083 346 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 TSC1Q92574 1164 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 EVI5LQ96CN4 794 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 TPCN1Q9ULQ1 816 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 SLIT1O75093 1534 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 TPM3P06753 285 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 CCDC192P0DO97 292 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 CREB3L3Q68CJ9 461 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 SMAP1Q8IYB5 467 aaPredicted RBP15□□□□□ -0.01
LINC01561-201ENST00000369071 ABTB2Q8N961 1025 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 NECAB1Q8N987 351 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 PRDM4Q9UKN5 801 aa15□□□□□ -0.01
LINC01561-201ENST00000369071 ARHGAP23Q9P227 1491 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 PLCB2Q00722 1185 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 MAP4K1Q92918 833 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 SNRKQ9NRH2 765 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 PYCARDQ9ULZ3 195 aa14.99□□□□□ -0.01
LINC01561-201ENST00000369071 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
LINC01561-201ENST00000369071 IFIT2P09913 472 aaKnown RBP14.98□□□□□ -0.01
LINC01561-201ENST00000369071 PDIA4P13667 645 aaKnown RBP14.98□□□□□ -0.01
LINC01561-201ENST00000369071 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
LINC01561-201ENST00000369071 DDX54Q8TDD1 881 aaKnown RBP14.98□□□□□ -0.01
LINC01561-201ENST00000369071 PA2G4Q9UQ80 394 aaKnown RBP14.98□□□□□ -0.01
LINC01561-201ENST00000369071 ELP1O95163 1332 aa14.98□□□□□ -0.01
LINC01561-201ENST00000369071 ALDH1L1O75891 902 aa14.98□□□□□ -0.01
LINC01561-201ENST00000369071 ARID3AQ99856 593 aa14.98□□□□□ -0.01
LINC01561-201ENST00000369071 SOCS7O14512 581 aa14.97□□□□□ -0.01
LINC01561-201ENST00000369071 KRT85P78386 507 aa14.97□□□□□ -0.01
LINC01561-201ENST00000369071 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms