RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
EFNA1-201ENST00000368406 NFIXQ14938 502 aa16.22■□□□□ 0.19
EFNA1-201ENST00000368406 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
EFNA1-201ENST00000368406 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
EFNA1-201ENST00000368406 VAMP4O75379 141 aa16.21■□□□□ 0.19
EFNA1-201ENST00000368406 DDR1Q08345 913 aa16.21■□□□□ 0.19
EFNA1-201ENST00000368406 PDIA6Q15084 440 aa16.21■□□□□ 0.19
EFNA1-201ENST00000368406 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
EFNA1-201ENST00000368406 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
EFNA1-201ENST00000368406 LRP10Q7Z4F1 713 aa16.2■□□□□ 0.18
EFNA1-201ENST00000368406 SMC4Q9NTJ3 1288 aa16.2■□□□□ 0.18
EFNA1-201ENST00000368406 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
EFNA1-201ENST00000368406 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
EFNA1-201ENST00000368406 UTRNP46939 3433 aa16.2■□□□□ 0.18
EFNA1-201ENST00000368406 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
EFNA1-201ENST00000368406 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 ANXA1P04083 346 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 TGFB2P61812 414 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 NLGN2Q8NFZ4 835 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
EFNA1-201ENST00000368406 KIF13BQ9NQT8 1826 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 C10orf71Q711Q0 1435 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 SETDB2Q96T68 719 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
EFNA1-201ENST00000368406 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
EFNA1-201ENST00000368406 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
EFNA1-201ENST00000368406 SERPINB2P05120 415 aa16.17■□□□□ 0.18
EFNA1-201ENST00000368406 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
EFNA1-201ENST00000368406 PROSER3Q2NL68 480 aa16.17■□□□□ 0.18
EFNA1-201ENST00000368406 ALDH1L2Q3SY69 923 aa16.17■□□□□ 0.18
EFNA1-201ENST00000368406 CARMIL3Q8ND23 1372 aa16.16■□□□□ 0.18
EFNA1-201ENST00000368406 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
EFNA1-201ENST00000368406 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
EFNA1-201ENST00000368406 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
EFNA1-201ENST00000368406 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
EFNA1-201ENST00000368406 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
EFNA1-201ENST00000368406 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
EFNA1-201ENST00000368406 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
EFNA1-201ENST00000368406 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
EFNA1-201ENST00000368406 HLFQ16534 295 aa16.14■□□□□ 0.17
EFNA1-201ENST00000368406 COPS6Q7L5N1 327 aa16.14■□□□□ 0.17
EFNA1-201ENST00000368406 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
EFNA1-201ENST00000368406 AFDNP55196 1824 aaKnown RBP16.14■□□□□ 0.17
EFNA1-201ENST00000368406 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
EFNA1-201ENST00000368406 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
EFNA1-201ENST00000368406 PHAXQ9H814 394 aaKnown RBP16.13■□□□□ 0.17
EFNA1-201ENST00000368406 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
EFNA1-201ENST00000368406 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
EFNA1-201ENST00000368406 FLIIQ13045 1269 aa16.12■□□□□ 0.17
EFNA1-201ENST00000368406 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
EFNA1-201ENST00000368406 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
EFNA1-201ENST00000368406 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
EFNA1-201ENST00000368406 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
EFNA1-201ENST00000368406 NUP98P52948 1817 aa16.12■□□□□ 0.17
EFNA1-201ENST00000368406 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
EFNA1-201ENST00000368406 BCAR3O75815 825 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 GPR162Q16538 588 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 ZBTB3Q9H5J0 574 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 A0A0G2JLW4 131 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 PRR5LQ6MZQ0 368 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 NBPF5PQ86XG9 351 aaPredicted RBP16.11■□□□□ 0.17
EFNA1-201ENST00000368406 CNBD1Q8NA66 436 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
EFNA1-201ENST00000368406 KIAA1551Q9HCM1 1747 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 DPEP1P16444 411 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 KCNA3P22001 575 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 ANKRD13DQ6ZTN6 518 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 G2E3Q7L622 706 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
EFNA1-201ENST00000368406 PTPRCP08575 1304 aa16.09■□□□□ 0.17
EFNA1-201ENST00000368406 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
EFNA1-201ENST00000368406 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
EFNA1-201ENST00000368406 PDE6BP35913 854 aa16.09■□□□□ 0.17
EFNA1-201ENST00000368406 ST5P78524 1137 aa16.09■□□□□ 0.17
EFNA1-201ENST00000368406 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
EFNA1-201ENST00000368406 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
EFNA1-201ENST00000368406 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
EFNA1-201ENST00000368406 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
EFNA1-201ENST00000368406 N4BP2Q86UW6 1770 aaPredicted RBP16.08■□□□□ 0.16
EFNA1-201ENST00000368406 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
EFNA1-201ENST00000368406 NPHP1O15259 732 aa16.08■□□□□ 0.16
EFNA1-201ENST00000368406 YBX3P16989 372 aaKnown RBP eCLIP16.08■□□□□ 0.164e-11■■■■□ 20.7
EFNA1-201ENST00000368406 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
EFNA1-201ENST00000368406 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
EFNA1-201ENST00000368406 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
EFNA1-201ENST00000368406 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
EFNA1-201ENST00000368406 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
EFNA1-201ENST00000368406 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
EFNA1-201ENST00000368406 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms