RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 CALRP27797 417 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 AXDND1Q5T1B0 1012 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 KIF5CO60282 957 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 CAMK4Q16566 473 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 EDC4Q6P2E9 1401 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 VAMP4O75379 141 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 CDK5RAP3Q96JB5 506 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 USP26Q9BXU7 913 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 UNC13BO14795 1591 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 TOP1P11387 765 aaKnown RBP13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 NOLC1Q14978 699 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 RAD50Q92878 1312 aa13.73□□□□□ -0.21
CDC42BPA-202ENST00000366764 FLT4P35916 1363 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 KANK3Q6NY19 840 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
CDC42BPA-202ENST00000366764 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 AK9Q5TCS8 1911 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 CCAR1Q8IX12 1150 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 F6X3S4 739 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 F13A1P00488 732 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 JAKMIP3Q5VZ66 844 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 FSIP1Q8NA03 581 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
CDC42BPA-202ENST00000366764 ATP10AO60312 1499 aa13.71□□□□□ -0.22
CDC42BPA-202ENST00000366764 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.22
CDC42BPA-202ENST00000366764 MPNDQ8N594 471 aa13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 BMS1Q14692 1282 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 ZNF397Q8NF99 534 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 SNW1Q13573 536 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-202ENST00000366764 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 MEIS3Q99687 375 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 SEC24BO95487 1268 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 FEZ1Q99689 392 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 AIDAQ96BJ3 306 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 TDO2P48775 406 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
CDC42BPA-202ENST00000366764 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 BMP15O95972 392 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 MYL6BP14649 208 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 CASQ1P31415 396 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 TUBBP07437 444 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPA-202ENST00000366764 GOLGA6L7A0A1B0GV03 622 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 FGFR1OPO95684 399 aaKnown RBP13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 HOXB7P09629 217 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 CT47A1Q5JQC4 288 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 ZNF287Q9HBT7 754 aa13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPA-202ENST00000366764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.67□□□□□ -0.221e-35■■■■□ 20
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms