RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 RAPGEF4Q8WZA2 1011 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
SGMS1-202ENST00000361781 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 SERPINC1P01008 464 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
SGMS1-202ENST00000361781 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
SGMS1-202ENST00000361781 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 FAM227BQ96M60 508 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 CFAP45Q9UL16 551 aa16.09■□□□□ 0.17
SGMS1-202ENST00000361781 CEP57L1Q8IYX8 460 aa16.08■□□□□ 0.17
SGMS1-202ENST00000361781 TRPM2O94759 1503 aa16.08■□□□□ 0.17
SGMS1-202ENST00000361781 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
SGMS1-202ENST00000361781 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
SGMS1-202ENST00000361781 ZC3H6P61129 1189 aaKnown RBP16.08■□□□□ 0.16
SGMS1-202ENST00000361781 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
SGMS1-202ENST00000361781 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 SGSM2O43147 1006 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
SGMS1-202ENST00000361781 BRPF1P55201 1214 aaPredicted RBP16.07■□□□□ 0.16
SGMS1-202ENST00000361781 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 TRDNQ13061 729 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 PYCARDQ9ULZ3 195 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 CLTCL1P53675 1640 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 HAND2P61296 217 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
SGMS1-202ENST00000361781 MYD88Q99836 296 aa16.07■□□□□ 0.16
SGMS1-202ENST00000361781 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
SGMS1-202ENST00000361781 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 A0A087WWV3 80 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 POLR3GO15318 223 aaPredicted RBP16.06■□□□□ 0.16
SGMS1-202ENST00000361781 LIG1P18858 919 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 RASSF8Q8NHQ8 419 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 NLRP1Q9C000 1473 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 SKILP12757 684 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
SGMS1-202ENST00000361781 PTH1RQ03431 593 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
SGMS1-202ENST00000361781 TRIM29Q14134 588 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 CCAR1Q8IX12 1150 aaKnown RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 ZFYVE9O95405 1425 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 DDX19AQ9NUU7 478 aaKnown RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 HSPA4P34932 840 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
SGMS1-202ENST00000361781 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
SGMS1-202ENST00000361781 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 KIF18AQ8NI77 898 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 CFAP100Q494V2 611 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 RRP12Q5JTH9 1297 aaKnown RBP16.04■□□□□ 0.16
SGMS1-202ENST00000361781 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
SGMS1-202ENST00000361781 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 MADDQ8WXG6 1647 aa16.04■□□□□ 0.16
SGMS1-202ENST00000361781 URI1O94763 535 aaPredicted RBP16.03■□□□□ 0.16
SGMS1-202ENST00000361781 LARGE1O95461 756 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 CCDC129Q6ZRS4 1044 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 ARGLU1Q9NWB6 273 aaPredicted RBP16.03■□□□□ 0.16
SGMS1-202ENST00000361781 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 RAD50Q92878 1312 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 SFPQP23246 707 aaKnown RBP eCLIP16.03■□□□□ 0.16
SGMS1-202ENST00000361781 DDIT3P35638 169 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 ME3Q16798 604 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 NEK1Q96PY6 1258 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 GOLIM4O00461 696 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
SGMS1-202ENST00000361781 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.16
SGMS1-202ENST00000361781 JAK2O60674 1132 aa16.02■□□□□ 0.16
SGMS1-202ENST00000361781 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 Q6ZUG5 572 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.15
SGMS1-202ENST00000361781 E9PCH4 1651 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 TEX35Q5T0J7 233 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 CBX8Q9HC52 389 aa16.02■□□□□ 0.15
SGMS1-202ENST00000361781 KCNQ3O43525 872 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 TTC6Q86TZ1 520 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 UBXN4Q92575 508 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 CLASP1Q7Z460 1538 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 KRT32Q14532 448 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
SGMS1-202ENST00000361781 ANO10Q9NW15 660 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms