RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TUBGCP6Q96RT7 1819 aa19.56■□□□□ 0.72
IFT140-201ENST00000361339 ZNF500O60304 480 aaPredicted RBP19.56■□□□□ 0.72
IFT140-201ENST00000361339 CPA1P15085 419 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
IFT140-201ENST00000361339 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 PLCB2Q00722 1185 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
IFT140-201ENST00000361339 MYL6BP14649 208 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
IFT140-201ENST00000361339 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
IFT140-201ENST00000361339 DBF4Q9UBU7 674 aaPredicted RBP19.53■□□□□ 0.72
IFT140-201ENST00000361339 DYNC1I1O14576 645 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 SASS6Q6UVJ0 657 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 RASEFQ8IZ41 740 aa19.52■□□□□ 0.72
IFT140-201ENST00000361339 KAZALD1Q96I82 304 aa19.52■□□□□ 0.72
IFT140-201ENST00000361339 NUCB2P80303 420 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 GDPD2Q9HCC8 539 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 CACNA1FO60840 1977 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 RGPD5Q99666 1765 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SUCLG2Q96I99 432 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SIL1Q9H173 461 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 CSPP1Q1MSJ5 1256 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SMAP1Q8IYB5 467 aaPredicted RBP19.51■□□□□ 0.71
IFT140-201ENST00000361339 PDLIM2Q96JY6 352 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 ERBB3P21860 1342 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 TERF1P54274 439 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 COL9A3Q14050 684 aaPredicted RBP19.5■□□□□ 0.71
IFT140-201ENST00000361339 NFATC2IPQ8NCF5 419 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 PDIA6Q15084 440 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
IFT140-201ENST00000361339 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 RAB11FIP3O75154 756 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 HOXB7P09629 217 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 KSR2Q6VAB6 950 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
IFT140-201ENST00000361339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
IFT140-201ENST00000361339 LMO7Q8WWI1 1683 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
IFT140-201ENST00000361339 LRSAM1Q6UWE0 723 aa19.48■□□□□ 0.71
IFT140-201ENST00000361339 CCDC8Q9H0W5 538 aaPredicted RBP19.48■□□□□ 0.71
IFT140-201ENST00000361339 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 SGSM2O43147 1006 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 MCCP23508 829 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 PTH1RQ03431 593 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 HSPA4P34932 840 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 LSG1Q9H089 658 aaKnown RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 CWC22Q9HCG8 908 aaKnown RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 SNX14Q9Y5W7 946 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 SLIT3O75094 1523 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 KIAA2012Q0VF49 1180 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
IFT140-201ENST00000361339 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 ZNF496Q96IT1 587 aaPredicted RBP19.46■□□□□ 0.71
IFT140-201ENST00000361339 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
IFT140-201ENST00000361339 SASH1O94885 1247 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 ZNF142P52746 1687 aaPredicted RBP19.45■□□□□ 0.7
IFT140-201ENST00000361339 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 AACSQ86V21 672 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 GRM8O00222 908 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 LARGE1O95461 756 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 CUL4AQ13619 759 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
IFT140-201ENST00000361339 AOX1Q06278 1338 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RAD50Q92878 1312 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 ADCK5Q3MIX3 580 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 EDC3Q96F86 508 aaKnown RBP19.44■□□□□ 0.7
IFT140-201ENST00000361339 MEGF6O75095 1541 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 NCAPD2Q15021 1401 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 CHGBP05060 677 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 ZSCAN20P17040 1043 aaPredicted RBP19.43■□□□□ 0.7
IFT140-201ENST00000361339 CLASRPQ8N2M8 674 aaKnown RBP19.43■□□□□ 0.7
IFT140-201ENST00000361339 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 FAM227BQ96M60 508 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 USP25Q9UHP3 1055 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 MTERF4Q7Z6M4 381 aaKnown RBP19.42■□□□□ 0.7
IFT140-201ENST00000361339 MYD88Q99836 296 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms