RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PDE4CQ08493 712 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 PDE3AQ14432 1141 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 WDR63Q8IWG1 891 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 FAM161BQ96MY7 647 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 FKBPLQ9UIM3 349 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 ABCC11Q96J66 1382 aa9.39□□□□□ -0.91
CLCN3-202ENST00000360642 CLTCQ00610 1675 aaKnown RBP9.38□□□□□ -0.91
CLCN3-202ENST00000360642 RAB15P59190 212 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 MORN1Q5T089 497 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
CLCN3-202ENST00000360642 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 ADGRB2O60241 1585 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 REREQ9P2R6 1566 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 CD163L1Q9NR16 1453 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
CLCN3-202ENST00000360642 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 RNF19AQ9NV58 838 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 MED14O60244 1454 aa9.37□□□□□ -0.91
CLCN3-202ENST00000360642 RBM47A0AV96 593 aaKnown RBP9.36□□□□□ -0.91
CLCN3-202ENST00000360642 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
CLCN3-202ENST00000360642 NLRP1Q9C000 1473 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
CLCN3-202ENST00000360642 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
CLCN3-202ENST00000360642 COL3A1P02461 1466 aaPredicted RBP9.36□□□□□ -0.91
CLCN3-202ENST00000360642 AGLP35573 1532 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 RARSP54136 660 aaKnown RBP9.35□□□□□ -0.91
CLCN3-202ENST00000360642 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLCN3-202ENST00000360642 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 STK26Q9P289 416 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 DIP2BQ9P265 1576 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 ANKRD26Q9UPS8 1709 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 NAA30Q147X3 362 aaPredicted RBP9.35□□□□□ -0.91
CLCN3-202ENST00000360642 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
CLCN3-202ENST00000360642 PRAM1Q96QH2 718 aa9.35□□□□□ -0.91
CLCN3-202ENST00000360642 ARHGEF40Q8TER5 1519 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 IGHDP01880 384 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
CLCN3-202ENST00000360642 CYB5RLQ6IPT4 315 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 FYB1O15117 783 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 TSNAXIP1Q2TAA8 658 aa9.34□□□□□ -0.91
CLCN3-202ENST00000360642 LYPD8Q6UX82 237 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
CLCN3-202ENST00000360642 PSME1Q06323 249 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 AAMPQ13685 434 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 U2AF1L5P0DN76 240 aaPredicted RBP9.33□□□□□ -0.92
CLCN3-202ENST00000360642 U2AF1Q01081 240 aaKnown RBP eCLIP9.33□□□□□ -0.928e-8■■■■□ 19.8
CLCN3-202ENST00000360642 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
CLCN3-202ENST00000360642 DLC1Q96QB1 1528 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 PNPLA6Q8IY17 1366 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
CLCN3-202ENST00000360642 SOX11P35716 441 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 FAM98CQ17RN3 349 aaKnown RBP9.32□□□□□ -0.92
CLCN3-202ENST00000360642 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
CLCN3-202ENST00000360642 POTEHQ6S545 545 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 A2ML1A8K2U0 1454 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 SETD1AO15047 1707 aaKnown RBP9.32□□□□□ -0.92
CLCN3-202ENST00000360642 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
CLCN3-202ENST00000360642 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
CLCN3-202ENST00000360642 FAM177A1Q8N128 213 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-202ENST00000360642 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
CLCN3-202ENST00000360642 POGKQ9P215 609 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 TCF3P15923 654 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 CLCN6P51797 869 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 TSEN2Q8NCE0 465 aaKnown RBP9.31□□□□□ -0.92
CLCN3-202ENST00000360642 CDK19Q9BWU1 502 aa9.31□□□□□ -0.92
CLCN3-202ENST00000360642 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-202ENST00000360642 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-202ENST00000360642 RLBP1P12271 317 aa9.3□□□□□ -0.92
CLCN3-202ENST00000360642 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
CLCN3-202ENST00000360642 APLP1P51693 650 aa9.3□□□□□ -0.92
CLCN3-202ENST00000360642 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms