RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 FCHSD2O94868 740 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 KRBA2Q6ZNG9 492 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 RSRC1Q96IZ7 334 aaKnown RBP15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 ZNF76P36508 570 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 CCDC114Q96M63 670 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 RRAGDQ9NQL2 400 aaPredicted RBP15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 CNPY2Q9Y2B0 182 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 PHACTR2O75167 634 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 IGHDP01880 384 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 NAA25Q14CX7 972 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 GTF3C6Q969F1 213 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
CCDC144A-203ENST00000360495 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 NCOA2Q15596 1464 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 N4BP3O15049 544 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 MYO1BO43795 1136 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 UBA5Q9GZZ9 404 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 CPSF2Q9P2I0 782 aaKnown RBP15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 USP5P45974 858 aa15.41■□□□□ 0.06
CCDC144A-203ENST00000360495 SPG7Q9UQ90 795 aa15.4■□□□□ 0.06
CCDC144A-203ENST00000360495 KIF4AO95239 1232 aa15.4■□□□□ 0.06
CCDC144A-203ENST00000360495 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
CCDC144A-203ENST00000360495 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
CCDC144A-203ENST00000360495 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
CCDC144A-203ENST00000360495 CTAGE9A4FU28 777 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 AKR1B10O60218 316 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 SYT1P21579 422 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 PTGS1P23219 599 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 DNAJC25Q9H1X3 360 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 A0A1B0GUA9 196 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 KIF5BP33176 963 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 PIP4K2BP78356 416 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC82Q8N4S0 544 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 ZEB2O60315 1214 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 CTNNA2P26232 953 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 U2AF2P26368 475 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 SSRP1Q08945 709 aaKnown RBP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 LRP2BPQ9P2M1 347 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 KANK3Q6NY19 840 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 AOPEPQ8N6M6 819 aa15.39■□□□□ 0.05
CCDC144A-203ENST00000360495 VGLL3A8MV65 326 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 MXRA7P84157 204 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC40Q4G0X9 1142 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 DRC1Q96MC2 740 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 SLC12A7Q9Y666 1083 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 TRIM27P14373 513 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 SYT10Q6XYQ8 523 aa15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 THUMPD2Q9BTF0 503 aaKnown RBP15.38■□□□□ 0.05
CCDC144A-203ENST00000360495 HFM1A2PYH4 1435 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 PAIP2Q9BPZ3 127 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 SEPT6Q14141 434 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 DNAJC21Q5F1R6 531 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 TRIM21P19474 475 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 WDR66Q8TBY9 1149 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 TUBB4BP68371 445 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
CCDC144A-203ENST00000360495 GOLIM4O00461 696 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 FAM76AQ8TAV0 307 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 PTPRGP23470 1445 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 CPLX4Q7Z7G2 160 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 PPP1R14CQ8TAE6 165 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 SYKP43405 635 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 SNX21Q969T3 373 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 PUF60Q9UHX1 559 aaKnown RBP15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms