RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 FLAD1Q8NFF5 587 aa9.22□□□□□ -0.93
HHLA3-201ENST00000359875 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
HHLA3-201ENST00000359875 CARD14Q9BXL6 1004 aa9.22□□□□□ -0.93
HHLA3-201ENST00000359875 WASHC2AQ641Q2 1341 aa9.22□□□□□ -0.93
HHLA3-201ENST00000359875 ANKRD26Q9UPS8 1709 aa9.22□□□□□ -0.93
HHLA3-201ENST00000359875 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.94
HHLA3-201ENST00000359875 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
HHLA3-201ENST00000359875 SPG7Q9UQ90 795 aa9.21□□□□□ -0.94
HHLA3-201ENST00000359875 RGPD2P0DJD1 1756 aa9.21□□□□□ -0.94
HHLA3-201ENST00000359875 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
HHLA3-201ENST00000359875 PKD1L3Q7Z443 1732 aa9.2□□□□□ -0.94
HHLA3-201ENST00000359875 IFFO2Q5TF58 517 aa9.2□□□□□ -0.94
HHLA3-201ENST00000359875 USHBP1Q8N6Y0 703 aa9.2□□□□□ -0.94
HHLA3-201ENST00000359875 CYP27B1O15528 508 aa9.19□□□□□ -0.94
HHLA3-201ENST00000359875 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
HHLA3-201ENST00000359875 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
HHLA3-201ENST00000359875 C5P01031 1676 aa9.19□□□□□ -0.94
HHLA3-201ENST00000359875 SOWAHBA6NEL2 793 aa9.18□□□□□ -0.94
HHLA3-201ENST00000359875 GPR162Q16538 588 aa9.18□□□□□ -0.94
HHLA3-201ENST00000359875 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
HHLA3-201ENST00000359875 ZNF784Q8NCA9 323 aaPredicted RBP9.18□□□□□ -0.94
HHLA3-201ENST00000359875 KAT6BQ8WYB5 2073 aa9.18□□□□□ -0.94
HHLA3-201ENST00000359875 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
HHLA3-201ENST00000359875 PPM1GO15355 546 aaPredicted RBP9.17□□□□□ -0.94
HHLA3-201ENST00000359875 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
HHLA3-201ENST00000359875 KCNQ4P56696 695 aa9.17□□□□□ -0.94
HHLA3-201ENST00000359875 PRSS12P56730 875 aa9.17□□□□□ -0.94
HHLA3-201ENST00000359875 EIF4G2P78344 907 aaKnown RBP eCLIP9.17□□□□□ -0.94
HHLA3-201ENST00000359875 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
HHLA3-201ENST00000359875 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
HHLA3-201ENST00000359875 IFNL2Q8IZJ0 200 aa9.17□□□□□ -0.94
HHLA3-201ENST00000359875 CCER1Q8TC90 406 aaPredicted RBP9.17□□□□□ -0.94
HHLA3-201ENST00000359875 TUBGCP6Q96RT7 1819 aa9.17□□□□□ -0.94
HHLA3-201ENST00000359875 CHD4Q14839 1912 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 OSBPP22059 807 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 AK7Q96M32 723 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 EYA1Q99502 592 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 CD2APQ9Y5K6 639 aa9.16□□□□□ -0.94
HHLA3-201ENST00000359875 C4BP0C0L5 1744 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 TOGARAM1Q9Y4F4 1720 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 HSP90AB1P08238 724 aaKnown RBP9.15□□□□□ -0.94
HHLA3-201ENST00000359875 PHKG2P15735 406 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 SSFA2P28290 1259 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 PIGBQ92521 554 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
HHLA3-201ENST00000359875 UTRNP46939 3433 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 SIK1P57059 783 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 EIF4A2Q14240 407 aaKnown RBP9.14□□□□□ -0.95
HHLA3-201ENST00000359875 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.14□□□□□ -0.95
HHLA3-201ENST00000359875 SEPT9Q9UHD8 586 aaPredicted RBP9.14□□□□□ -0.95
HHLA3-201ENST00000359875 TAF1LQ8IZX4 1826 aa9.14□□□□□ -0.95
HHLA3-201ENST00000359875 ITGB4P16144 1822 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 RGS20O76081 388 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 AMOTQ4VCS5 1084 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 NLGN2Q8NFZ4 835 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
HHLA3-201ENST00000359875 MAP2P11137 1827 aaKnown RBP9.12□□□□□ -0.95
HHLA3-201ENST00000359875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.12□□□□□ -0.95
HHLA3-201ENST00000359875 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
HHLA3-201ENST00000359875 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
HHLA3-201ENST00000359875 POLR3GLQ9BT43 218 aa9.12□□□□□ -0.95
HHLA3-201ENST00000359875 PANK3Q9H999 370 aa9.12□□□□□ -0.95
HHLA3-201ENST00000359875 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
HHLA3-201ENST00000359875 ZNF831Q5JPB2 1677 aa9.12□□□□□ -0.95
HHLA3-201ENST00000359875 HSPA5P11021 654 aaKnown RBP9.11□□□□□ -0.95
HHLA3-201ENST00000359875 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 BCAMP50895 628 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 KCNV2Q8TDN2 545 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 KDRP35968 1356 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 UBR3Q6ZT12 1888 aa9.11□□□□□ -0.95
HHLA3-201ENST00000359875 GNPATO15228 680 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
HHLA3-201ENST00000359875 YBX3P16989 372 aaKnown RBP eCLIP9.1□□□□□ -0.956e-6■■■■□ 20
HHLA3-201ENST00000359875 TNNT2P45379 298 aaPredicted RBP9.1□□□□□ -0.95
HHLA3-201ENST00000359875 MORC1Q86VD1 984 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 ATG3Q9NT62 314 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 KNSTRNQ9Y448 316 aa9.1□□□□□ -0.95
HHLA3-201ENST00000359875 CNTNAP4Q9C0A0 1308 aa9.09□□□□□ -0.95
HHLA3-201ENST00000359875 ITGBL1O95965 494 aaPredicted RBP9.09□□□□□ -0.95
HHLA3-201ENST00000359875 ITPK1Q13572 414 aa9.09□□□□□ -0.95
HHLA3-201ENST00000359875 RC3H1Q5TC82 1133 aaKnown RBP9.09□□□□□ -0.95
HHLA3-201ENST00000359875 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
HHLA3-201ENST00000359875 RTCBQ9Y3I0 505 aaKnown RBP9.09□□□□□ -0.95
HHLA3-201ENST00000359875 CABP4P57796 275 aa9.08□□□□□ -0.96
HHLA3-201ENST00000359875 C1orf141Q5JVX7 400 aa9.08□□□□□ -0.96
HHLA3-201ENST00000359875 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
HHLA3-201ENST00000359875 ZNF530Q6P9A1 599 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms