RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 IFIT5Q13325 482 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 PTCD1O75127 700 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC172P0C7W6 258 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 TTC12Q9H892 705 aaPredicted RBP6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 VAT1LQ9HCJ6 419 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 TMOD3Q9NYL9 352 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 CGNQ9P2M7 1197 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC6Q16204 474 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 SH3BP5O60239 455 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 IL27Q8NEV9 243 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 IDEP14735 1019 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 RRS1Q15050 365 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 IPO4Q8TEX9 1081 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-201ENST00000355086 MYO1BO43795 1136 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 PSMC4P43686 418 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 PYM1Q9BRP8 204 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 IQCGQ9H095 443 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 JADE2Q9NQC1 790 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 VTI1AQ96AJ9 217 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 NAP1L3Q99457 506 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 ODF2LQ9ULJ1 636 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 KIF5BP33176 963 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 ANAPC4Q9UJX5 808 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 C6orf229H3BNL8 230 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 STX6O43752 255 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC63Q8NA47 563 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 GSDMDP57764 484 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 SCAND2PQ9GZW5 306 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 MAP7D1Q3KQU3 841 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 ZNF219Q9P2Y4 722 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 GOLGA8AA7E2F4 631 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 CCT2P78371 535 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 FSIP1Q8NA03 581 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 UBA7P41226 1012 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 KIF4AO95239 1232 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 CFAP70Q5T0N1 1121 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC144CPQ8IYA2 1237 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 CABP5Q9NP86 173 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 SLC12A5Q9H2X9 1139 aa6.64□□□□□ -1.35
SRGAP1-201ENST00000355086 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 LRRC27Q9C0I9 530 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 KAT14Q9H8E8 782 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 STX1AQ16623 288 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 RAD54L2Q9Y4B4 1467 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 CEP135Q66GS9 1140 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 C16orf45Q96MC5 204 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 EXOC1Q9NV70 894 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TSPY2A6NKD2 308 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 NEMFO60524 1076 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 ZBTB16Q05516 673 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 BAG3O95817 575 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 CFAP58Q5T655 872 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TBCAO75347 108 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TPD52P55327 224 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 SMC1BQ8NDV3 1235 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 ERMNQ8TAM6 284 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TRERF1Q96PN7 1200 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TMEM67Q5HYA8 995 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 TMC6Q7Z403 805 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 ZSCAN30Q86W11 494 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
SRGAP1-201ENST00000355086 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 HSPA4P34932 840 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 NCBP1Q09161 790 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 RASAL2Q9UJF2 1139 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 BIN1O00499 593 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 RTEL1-TNFRSF6BF6WH68 1400 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 MX1P20591 662 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 USP37Q86T82 979 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 NSRP1Q9H0G5 558 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 GOLGA6L9A6NEM1 432 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 NOL3O60936 208 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 SELENOOQ9BVL4 669 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 ATP2C2O75185 946 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 GSTA5Q7RTV2 222 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 TRMT112Q9UI30 125 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 KCNH5Q8NCM2 988 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 SNW1Q13573 536 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 SNX16P57768 344 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 PHACTR2O75167 634 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 MIS18AQ9NYP9 233 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC77Q9BR77 488 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 CEP83Q9Y592 693 aa6.62□□□□□ -1.35
SRGAP1-201ENST00000355086 MNAT1P51948 309 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 MPRIPQ6WCQ1 1025 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ARHGAP5Q13017 1502 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 DUSP27Q5VZP5 1158 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 BACH2Q9BYV9 841 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms