RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 BTG4Q9NY30 223 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 SPC24Q8NBT2 197 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 MRE11P49959 708 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 NMIQ13287 307 aaPredicted RBP11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
CSNK2A1-202ENST00000349736 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 DBNDD2Q9BQY9 259 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 CPLX1O14810 134 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 VPS37DQ86XT2 251 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 ABCF2Q9UG63 623 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 JAG2Q9Y219 1238 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 PTPRUQ92729 1446 aa11.33□□□□□ -0.6
CSNK2A1-202ENST00000349736 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 AK2P54819 239 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 RBM8AQ9Y5S9 174 aaKnown RBP11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 NPHP3Q7Z494 1330 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 DDX21Q9NR30 783 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 PTH1RQ03431 593 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 CNPY2Q9Y2B0 182 aa11.32□□□□□ -0.6
CSNK2A1-202ENST00000349736 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 SYAP1Q96A49 352 aaPredicted RBP11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 ATP7BP35670 1465 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 RAD21O60216 631 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
CSNK2A1-202ENST00000349736 CPSF1Q10570 1443 aaKnown RBP11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 GJB2P29033 226 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 LMTK2Q8IWU2 1503 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 KIAA0232Q92628 1395 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 IL25Q9H293 177 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 RIMBP3CA6NJZ7 1639 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 RIMBP3BA6NNM3 1639 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 RIMBP3Q9UFD9 1639 aa11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 POLR1AO95602 1720 aaPredicted RBP11.3□□□□□ -0.6
CSNK2A1-202ENST00000349736 SNAP23O00161 211 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 NRXN1Q9ULB1 1477 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 MYO3AQ8NEV4 1616 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 RXRAP19793 462 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 BRF1Q92994 677 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 MPHOSPH8Q99549 860 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 ADCK5Q3MIX3 580 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 CFAP74Q9C0B2 1584 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 EXOC5O00471 708 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 PHKG2P15735 406 aa11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 CWC25Q9NXE8 425 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-202ENST00000349736 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 CYP27B1O15528 508 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 DNM1Q05193 864 aaKnown RBP11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 IFIT5Q13325 482 aaKnown RBP11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 TRDNQ13061 729 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 GCKRQ14397 625 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 SNX21Q969T3 373 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
CSNK2A1-202ENST00000349736 GADD45BO75293 160 aaPredicted RBP11.27□□□□□ -0.6
CSNK2A1-202ENST00000349736 PSMA5P28066 241 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms