RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 TFCP2Q12800 502 aa16■□□□□ 0.15
CASC4-202ENST00000345795 KIAA0232Q92628 1395 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 DEPDC5O75140 1603 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 HYPKQ9NX55 129 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 BAG4O95429 457 aaKnown RBP15.99■□□□□ 0.15
CASC4-202ENST00000345795 NUCB2P80303 420 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 JAG2Q9Y219 1238 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
CASC4-202ENST00000345795 CAMK4Q16566 473 aa15.99■□□□□ 0.15
CASC4-202ENST00000345795 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
CASC4-202ENST00000345795 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
CASC4-202ENST00000345795 MYOM1P52179 1685 aa15.98■□□□□ 0.15
CASC4-202ENST00000345795 MSNP26038 577 aaKnown RBP15.98■□□□□ 0.15
CASC4-202ENST00000345795 NASPP49321 788 aaPredicted RBP15.98■□□□□ 0.15
CASC4-202ENST00000345795 PIBF1Q8WXW3 757 aa15.98■□□□□ 0.15
CASC4-202ENST00000345795 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
CASC4-202ENST00000345795 SYNE4Q8N205 404 aa15.97■□□□□ 0.15
CASC4-202ENST00000345795 DBNDD2Q9BQY9 259 aa15.97■□□□□ 0.15
CASC4-202ENST00000345795 GRPEL1Q9HAV7 217 aa15.97■□□□□ 0.15
CASC4-202ENST00000345795 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
CASC4-202ENST00000345795 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
CASC4-202ENST00000345795 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.15
CASC4-202ENST00000345795 NMIQ13287 307 aaPredicted RBP15.96■□□□□ 0.15
CASC4-202ENST00000345795 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 IL25Q9H293 177 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 BEND3Q5T5X7 828 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 KIF6Q6ZMV9 814 aa15.96■□□□□ 0.15
CASC4-202ENST00000345795 EAF2Q96CJ1 260 aaPredicted RBP15.96■□□□□ 0.15
CASC4-202ENST00000345795 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
CASC4-202ENST00000345795 LAMC1P11047 1609 aa15.96■□□□□ 0.14
CASC4-202ENST00000345795 SLAIN2Q9P270 581 aa15.96■□□□□ 0.14
CASC4-202ENST00000345795 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.14
CASC4-202ENST00000345795 LINS1Q8NG48 757 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 CEP126Q9P2H0 1117 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 TRMT112Q9UI30 125 aaKnown RBP15.95■□□□□ 0.14
CASC4-202ENST00000345795 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 IQSEC2Q5JU85 1478 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 SNAP23O00161 211 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 DNAJC10Q8IXB1 793 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 ABCF2Q9UG63 623 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 PPLO60437 1756 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 ZRSR1Q15695 479 aaKnown RBP15.95■□□□□ 0.14
CASC4-202ENST00000345795 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 TTC39AQ5SRH9 613 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 BLOC1S2Q6QNY1 142 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 SLC52A2Q9HAB3 445 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
CASC4-202ENST00000345795 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
CASC4-202ENST00000345795 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
CASC4-202ENST00000345795 CYP27B1O15528 508 aa15.94■□□□□ 0.14
CASC4-202ENST00000345795 PTH1RQ03431 593 aa15.94■□□□□ 0.14
CASC4-202ENST00000345795 LARP1BQ659C4 914 aaKnown RBP15.94■□□□□ 0.14
CASC4-202ENST00000345795 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
CASC4-202ENST00000345795 CDK12Q9NYV4 1490 aaPredicted RBP15.94■□□□□ 0.14
CASC4-202ENST00000345795 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
CASC4-202ENST00000345795 ERBB3P21860 1342 aa15.93■□□□□ 0.14
CASC4-202ENST00000345795 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
CASC4-202ENST00000345795 CREBRFQ8IUR6 639 aa15.93■□□□□ 0.14
CASC4-202ENST00000345795 PHKG2P15735 406 aa15.93■□□□□ 0.14
CASC4-202ENST00000345795 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
CASC4-202ENST00000345795 AK2P54819 239 aa15.93■□□□□ 0.14
CASC4-202ENST00000345795 RBM8AQ9Y5S9 174 aaKnown RBP15.93■□□□□ 0.14
CASC4-202ENST00000345795 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
CASC4-202ENST00000345795 RNF20Q5VTR2 975 aa15.92■□□□□ 0.14
CASC4-202ENST00000345795 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
CASC4-202ENST00000345795 SPC24Q8NBT2 197 aa15.92■□□□□ 0.14
CASC4-202ENST00000345795 PHF14O94880 888 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 RXRAP19793 462 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 SF3A1Q15459 793 aaKnown RBP15.91■□□□□ 0.14
CASC4-202ENST00000345795 LDHAL6AQ6ZMR3 332 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 RAD21O60216 631 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 CNPY2Q9Y2B0 182 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
CASC4-202ENST00000345795 CPLX1O14810 134 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 ANTXR1Q9H6X2 564 aa15.91■□□□□ 0.14
CASC4-202ENST00000345795 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
CASC4-202ENST00000345795 PI16Q6UXB8 463 aa15.9■□□□□ 0.14
CASC4-202ENST00000345795 NFXL1Q6ZNB6 911 aa15.9■□□□□ 0.14
CASC4-202ENST00000345795 ARHGEF28Q8N1W1 1705 aaKnown RBP15.9■□□□□ 0.14
CASC4-202ENST00000345795 PUS3Q9BZE2 481 aaKnown RBP15.9■□□□□ 0.14
CASC4-202ENST00000345795 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
CASC4-202ENST00000345795 IL2RBP14784 551 aa15.9■□□□□ 0.14
CASC4-202ENST00000345795 C8orf37Q96NL8 207 aa15.9■□□□□ 0.14
CASC4-202ENST00000345795 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
CASC4-202ENST00000345795 EXOC5O00471 708 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 GCKRQ14397 625 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 CKAP2LQ8IYA6 745 aa15.89■□□□□ 0.13
CASC4-202ENST00000345795 CWC25Q9NXE8 425 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms