RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
ECM2-201ENST00000344604 PRPF38AQ8NAV1 312 aaKnown RBP11.26□□□□□ -0.61
ECM2-201ENST00000344604 COG3Q96JB2 828 aa11.26□□□□□ -0.61
ECM2-201ENST00000344604 TSPAN18Q96SJ8 248 aa11.26□□□□□ -0.61
ECM2-201ENST00000344604 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 COQ9O75208 318 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 SCP2P22307 547 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 DCCP43146 1447 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
ECM2-201ENST00000344604 RAD50Q92878 1312 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 ZNF772Q68DY9 489 aaPredicted RBP11.25□□□□□ -0.61
ECM2-201ENST00000344604 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 IFT172Q9UG01 1749 aa11.25□□□□□ -0.61
ECM2-201ENST00000344604 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
ECM2-201ENST00000344604 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
ECM2-201ENST00000344604 PAXBP1Q9Y5B6 917 aa11.24□□□□□ -0.61
ECM2-201ENST00000344604 ZSCAN26Q16670 478 aa11.24□□□□□ -0.61
ECM2-201ENST00000344604 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
ECM2-201ENST00000344604 KIF18AQ8NI77 898 aa11.24□□□□□ -0.61
ECM2-201ENST00000344604 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
ECM2-201ENST00000344604 LARP1Q6PKG0 1096 aaKnown RBP11.23□□□□□ -0.61
ECM2-201ENST00000344604 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
ECM2-201ENST00000344604 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
ECM2-201ENST00000344604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
ECM2-201ENST00000344604 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
ECM2-201ENST00000344604 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
ECM2-201ENST00000344604 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
ECM2-201ENST00000344604 ATAD2Q6PL18 1390 aa11.23□□□□□ -0.61
ECM2-201ENST00000344604 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 CWC15Q9P013 229 aaKnown RBP11.22□□□□□ -0.61
ECM2-201ENST00000344604 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 MCTP2Q6DN12 878 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 KRBA2Q6ZNG9 492 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 TBC1D22AQ8WUA7 517 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
ECM2-201ENST00000344604 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 A0A1W2PP64 1363 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 EXOC8Q8IYI6 725 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 GOLGA6AQ9NYA3 693 aa11.22□□□□□ -0.61
ECM2-201ENST00000344604 TRPC5Q9UL62 973 aaPredicted RBP11.22□□□□□ -0.61
ECM2-201ENST00000344604 LRP6O75581 1613 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 RALGAPBQ86X10 1494 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.61
ECM2-201ENST00000344604 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 ATL2Q8NHH9 583 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 SMC3Q9UQE7 1217 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 ATP7BP35670 1465 aa11.21□□□□□ -0.61
ECM2-201ENST00000344604 PLIN1O60240 522 aa11.21□□□□□ -0.62
ECM2-201ENST00000344604 SEC24BO95487 1268 aa11.21□□□□□ -0.62
ECM2-201ENST00000344604 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.62
ECM2-201ENST00000344604 MFSD4BQ5TF39 518 aa11.21□□□□□ -0.62
ECM2-201ENST00000344604 UNC5CLQ8IV45 518 aa11.21□□□□□ -0.62
ECM2-201ENST00000344604 KDM2BQ8NHM5 1336 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 FYB1O15117 783 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 SETDB1Q15047 1291 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 TXLNBQ8N3L3 684 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 RBSNQ9H1K0 784 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 CTIFO43310 598 aaKnown RBP11.2□□□□□ -0.62
ECM2-201ENST00000344604 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
ECM2-201ENST00000344604 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
ECM2-201ENST00000344604 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
ECM2-201ENST00000344604 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 PACS2Q86VP3 889 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 INHBEP58166 350 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 ABCD1P33897 745 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 AP1ARQ63HQ0 302 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
ECM2-201ENST00000344604 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 ST7Q9NRC1 585 aa11.19□□□□□ -0.62
ECM2-201ENST00000344604 TRPM1Q7Z4N2 1603 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 CPSF2Q9P2I0 782 aaKnown RBP11.18□□□□□ -0.62
ECM2-201ENST00000344604 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 NEBLO76041 1014 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 HSP90AB2PQ58FF8 381 aa11.18□□□□□ -0.62
ECM2-201ENST00000344604 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms