RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FKBP8Q14318 412 aa24.2■■□□□ 1.46
CDHR4-201ENST00000343366 SRP68Q9UHB9 627 aaKnown RBP24.2■■□□□ 1.46
CDHR4-201ENST00000343366 KCNQ3O43525 872 aa24.19■■□□□ 1.46
CDHR4-201ENST00000343366 DALRD3Q5D0E6 543 aaKnown RBP24.19■■□□□ 1.46
CDHR4-201ENST00000343366 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
CDHR4-201ENST00000343366 RNF181Q9P0P0 153 aa24.18■■□□□ 1.46
CDHR4-201ENST00000343366 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
CDHR4-201ENST00000343366 POLRMTO00411 1230 aaKnown RBP24.17■■□□□ 1.46
CDHR4-201ENST00000343366 TM4SF1P30408 202 aa24.17■■□□□ 1.46
CDHR4-201ENST00000343366 SLFN5Q08AF3 891 aa24.17■■□□□ 1.46
CDHR4-201ENST00000343366 C16orf71Q8IYS4 520 aaPredicted RBP24.17■■□□□ 1.46
CDHR4-201ENST00000343366 RRAGCQ9HB90 399 aa24.17■■□□□ 1.46
CDHR4-201ENST00000343366 ZC3H4Q9UPT8 1303 aaKnown RBP24.16■■□□□ 1.46
CDHR4-201ENST00000343366 CCDC88AQ3V6T2 1871 aa24.16■■□□□ 1.46
CDHR4-201ENST00000343366 CHRNA5P30532 468 aa24.16■■□□□ 1.46
CDHR4-201ENST00000343366 TIAM2Q8IVF5 1701 aa24.15■■□□□ 1.46
CDHR4-201ENST00000343366 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
CDHR4-201ENST00000343366 PRELPP51888 382 aa24.15■■□□□ 1.46
CDHR4-201ENST00000343366 INTS5Q6P9B9 1019 aaKnown RBP24.15■■□□□ 1.46
CDHR4-201ENST00000343366 DNAJC10Q8IXB1 793 aa24.14■■□□□ 1.45
CDHR4-201ENST00000343366 ERBB4Q15303 1308 aa24.13■■□□□ 1.45
CDHR4-201ENST00000343366 CYP19A1P11511 503 aaPredicted RBP24.13■■□□□ 1.45
CDHR4-201ENST00000343366 TSR2Q969E8 191 aaKnown RBP24.13■■□□□ 1.45
CDHR4-201ENST00000343366 TRMT2AQ8IZ69 625 aaKnown RBP24.12■■□□□ 1.45
CDHR4-201ENST00000343366 SMC1BQ8NDV3 1235 aa24.12■■□□□ 1.45
CDHR4-201ENST00000343366 CT47B1P0C2W7 299 aaPredicted RBP24.11■■□□□ 1.45
CDHR4-201ENST00000343366 DUSP27Q5VZP5 1158 aa24.11■■□□□ 1.45
CDHR4-201ENST00000343366 SPINK5Q9NQ38 1064 aaPredicted RBP24.11■■□□□ 1.45
CDHR4-201ENST00000343366 USP16Q9Y5T5 823 aa24.1■■□□□ 1.45
CDHR4-201ENST00000343366 RASSF7Q02833 373 aa24.09■■□□□ 1.45
CDHR4-201ENST00000343366 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
CDHR4-201ENST00000343366 ZNF428Q96B54 188 aa24.09■■□□□ 1.45
CDHR4-201ENST00000343366 DICER1Q9UPY3 1922 aaKnown RBP24.08■■□□□ 1.45
CDHR4-201ENST00000343366 TWISTNBQ3B726 338 aaPredicted RBP24.08■■□□□ 1.45
CDHR4-201ENST00000343366 GLTPD2A6NH11 291 aa24.07■■□□□ 1.44
CDHR4-201ENST00000343366 TNS4Q8IZW8 715 aa24.07■■□□□ 1.44
CDHR4-201ENST00000343366 CACNA1FO60840 1977 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 EXOSC9Q06265 439 aaKnown RBP24.06■■□□□ 1.44
CDHR4-201ENST00000343366 HDGFL1Q5TGJ6 251 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 CCDC30Q5VVM6 783 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 ANKRD31Q8N7Z5 1873 aa24.06■■□□□ 1.44
CDHR4-201ENST00000343366 POTECB2RU33 542 aa24.05■■□□□ 1.44
CDHR4-201ENST00000343366 IL6STP40189 918 aaPredicted RBP24.05■■□□□ 1.44
CDHR4-201ENST00000343366 USPL1Q5W0Q7 1092 aa24.05■■□□□ 1.44
CDHR4-201ENST00000343366 FER1L6Q2WGJ9 1857 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 A0A087WZG4 1122 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 EIF2S2P20042 333 aaKnown RBP24.04■■□□□ 1.44
CDHR4-201ENST00000343366 LMNB1P20700 586 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 NFIXQ14938 502 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 BCL2L12Q9HB09 334 aa24.04■■□□□ 1.44
CDHR4-201ENST00000343366 DBF4Q9UBU7 674 aaPredicted RBP24.04■■□□□ 1.44
CDHR4-201ENST00000343366 VEGFAP15692 232 aaPredicted RBP24.03■■□□□ 1.44
CDHR4-201ENST00000343366 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
CDHR4-201ENST00000343366 NFKBIEO00221 500 aa24.02■■□□□ 1.44
CDHR4-201ENST00000343366 ELL2O00472 640 aaPredicted RBP24.02■■□□□ 1.44
CDHR4-201ENST00000343366 CAPN15O75808 1086 aa24.02■■□□□ 1.44
CDHR4-201ENST00000343366 HSPA1AP0DMV8 641 aaKnown RBP24.02■■□□□ 1.44
CDHR4-201ENST00000343366 HSPA1BP0DMV9 641 aaKnown RBP24.02■■□□□ 1.44
CDHR4-201ENST00000343366 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
CDHR4-201ENST00000343366 ZBTB1Q9Y2K1 713 aa24.02■■□□□ 1.44
CDHR4-201ENST00000343366 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
CDHR4-201ENST00000343366 VAMP4O75379 141 aa24.01■■□□□ 1.43
CDHR4-201ENST00000343366 A1BGP04217 495 aa24.01■■□□□ 1.43
CDHR4-201ENST00000343366 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CDHR4-201ENST00000343366 DDX21Q9NR30 783 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDHR4-201ENST00000343366 NARFQ9UHQ1 456 aa24.01■■□□□ 1.43
CDHR4-201ENST00000343366 COL11A2P13942 1736 aaPredicted RBP24.01■■□□□ 1.43
CDHR4-201ENST00000343366 CANXP27824 592 aaKnown RBP24■■□□□ 1.43
CDHR4-201ENST00000343366 EIF5P55010 431 aaKnown RBP24■■□□□ 1.43
CDHR4-201ENST00000343366 YTHDC1Q96MU7 727 aaKnown RBP24■■□□□ 1.43
CDHR4-201ENST00000343366 HYPKQ9NX55 129 aa24■■□□□ 1.43
CDHR4-201ENST00000343366 COL15A1P39059 1388 aa24■■□□□ 1.43
CDHR4-201ENST00000343366 ZPR1O75312 459 aa23.99■■□□□ 1.43
CDHR4-201ENST00000343366 RGL2O15211 777 aa23.98■■□□□ 1.43
CDHR4-201ENST00000343366 SCN7AQ01118 1682 aa23.97■■□□□ 1.43
CDHR4-201ENST00000343366 TTLL6Q8N841 843 aa23.97■■□□□ 1.43
CDHR4-201ENST00000343366 SERPINB2P05120 415 aa23.96■■□□□ 1.43
CDHR4-201ENST00000343366 ALDH1L2Q3SY69 923 aa23.96■■□□□ 1.43
CDHR4-201ENST00000343366 NBPF26B4DH59 902 aa23.95■■□□□ 1.42
CDHR4-201ENST00000343366 PDIA6Q15084 440 aa23.95■■□□□ 1.42
CDHR4-201ENST00000343366 NBPF10Q6P3W6 841 aaKnown RBP23.95■■□□□ 1.42
CDHR4-201ENST00000343366 NBPF15Q8N660 670 aa23.95■■□□□ 1.42
CDHR4-201ENST00000343366 CHPF2Q9P2E5 772 aa23.95■■□□□ 1.42
CDHR4-201ENST00000343366 ARFGEF2Q9Y6D5 1785 aa23.94■■□□□ 1.42
CDHR4-201ENST00000343366 NECTIN2Q92692 538 aa23.94■■□□□ 1.42
CDHR4-201ENST00000343366 MYL6BP14649 208 aa23.93■■□□□ 1.42
CDHR4-201ENST00000343366 KIF6Q6ZMV9 814 aa23.92■■□□□ 1.42
CDHR4-201ENST00000343366 ZNF330Q9Y3S2 320 aaPredicted RBP23.92■■□□□ 1.42
CDHR4-201ENST00000343366 ERVV-1B6SEH8 477 aa23.91■■□□□ 1.42
CDHR4-201ENST00000343366 DDX58O95786 925 aaKnown RBP23.91■■□□□ 1.42
CDHR4-201ENST00000343366 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
CDHR4-201ENST00000343366 DZIP3Q86Y13 1208 aaKnown RBP23.91■■□□□ 1.42
CDHR4-201ENST00000343366 C2CD5Q86YS7 1000 aa23.91■■□□□ 1.42
CDHR4-201ENST00000343366 ZNF652Q9Y2D9 606 aa23.91■■□□□ 1.42
CDHR4-201ENST00000343366 CLEC4GQ6UXB4 293 aa23.9■■□□□ 1.42
CDHR4-201ENST00000343366 LRP10Q7Z4F1 713 aa23.9■■□□□ 1.42
CDHR4-201ENST00000343366 SLX4Q8IY92 1834 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms