RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TDO2P48775 406 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 CNPY2Q9Y2B0 182 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 CWF19L2Q2TBE0 894 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 HMG20BQ9P0W2 317 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 TBX22Q9Y458 520 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 ERVK-7P63135 1459 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 UBAC1Q9BSL1 405 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 ANO10Q9NW15 660 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 FILIP1LQ4L180 1135 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 CCDC70Q6NSX1 233 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 ARHGEF5Q12774 1597 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
VCAN-202ENST00000342785 LRP2BPQ9P2M1 347 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 ABCF2Q9UG63 623 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 MSH6P52701 1360 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 TEX35Q5T0J7 233 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 LMBR1LQ6UX01 489 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 KDM5CP41229 1560 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 AK2P54819 239 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 UVSSAQ2YD98 709 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 TTLL5Q6EMB2 1281 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 EDC4Q6P2E9 1401 aaKnown RBP8.43□□□□□ -1.06
VCAN-202ENST00000342785 ZMYM3Q14202 1370 aa8.43□□□□□ -1.06
VCAN-202ENST00000342785 HOXC9P31274 260 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 TMOD3Q9NYL9 352 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 CCP110O43303 1012 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 PLEKHF1Q96S99 279 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 F13A1P00488 732 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 DNM1Q05193 864 aaKnown RBP8.42□□□□□ -1.06
VCAN-202ENST00000342785 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 TTC41PQ6P2S7 1318 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 SFPQP23246 707 aaKnown RBP eCLIP8.42□□□□□ -1.06
VCAN-202ENST00000342785 FSIP1Q8NA03 581 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 LRRC2Q9BYS8 371 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 PNMA6EA0A0J9YXQ4 647 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 HAND2P61296 217 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
VCAN-202ENST00000342785 ABCC4O15439 1325 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 GCP02774 474 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 CFAP100Q494V2 611 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 LDHAL6AQ6ZMR3 332 aa8.42□□□□□ -1.06
VCAN-202ENST00000342785 ZNF213O14771 459 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 SLC3A2P08195 630 aaKnown RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 CPA1P15085 419 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 TXLNAP40222 546 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 SYT1P21579 422 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 PIP4K2AP48426 406 aaPredicted RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 CWC25Q9NXE8 425 aaPredicted RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 USP16Q9Y5T5 823 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.41□□□□□ -1.06
VCAN-202ENST00000342785 MAP3K5Q99683 1374 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 GOLGA8BA8MQT2 603 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 SMTNL1A8MU46 457 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 GPTP24298 496 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 NAPBQ9H115 298 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 ORC3Q9UBD5 711 aaPredicted RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 CLIP2Q9UDT6 1046 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 TRMT112Q9UI30 125 aaKnown RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 CTAGE5O15320 804 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
VCAN-202ENST00000342785 HSP90B2PQ58FF3 399 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 DACT1Q9NYF0 836 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 ABCA8O94911 1581 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 CBFA2T2O43439 604 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 PDCL2Q8N4E4 241 aa8.41□□□□□ -1.06
VCAN-202ENST00000342785 PTPN14Q15678 1187 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 PPFIBP1Q86W92 1011 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
VCAN-202ENST00000342785 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 GSPT1P15170 499 aaKnown RBP8.4□□□□□ -1.06
VCAN-202ENST00000342785 IGHMBP2P38935 993 aaKnown RBP8.4□□□□□ -1.06
VCAN-202ENST00000342785 IP6K1Q92551 441 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 WASF1Q92558 559 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 RRAGDQ9NQL2 400 aaPredicted RBP8.4□□□□□ -1.06
VCAN-202ENST00000342785 NBPF7P0C2Y1 421 aaPredicted RBP8.4□□□□□ -1.06
VCAN-202ENST00000342785 PDE4CQ08493 712 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.06
VCAN-202ENST00000342785 NFATC2IPQ8NCF5 419 aa8.4□□□□□ -1.07
VCAN-202ENST00000342785 CEP89Q96ST8 783 aa8.4□□□□□ -1.07
VCAN-202ENST00000342785 NPHP3Q7Z494 1330 aa8.4□□□□□ -1.07
VCAN-202ENST00000342785 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.07
VCAN-202ENST00000342785 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.07
VCAN-202ENST00000342785 TTC12Q9H892 705 aaPredicted RBP8.4□□□□□ -1.07
VCAN-202ENST00000342785 DDX21Q9NR30 783 aaKnown RBP eCLIP8.4□□□□□ -1.07
VCAN-202ENST00000342785 NOL7Q9UMY1 257 aaKnown RBP8.4□□□□□ -1.07
VCAN-202ENST00000342785 BIN1O00499 593 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 CAVIN2O95810 425 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
VCAN-202ENST00000342785 TRIM34Q9BYJ4 488 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 USP19O94966 1318 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 MINDY4BA8MYZ0 360 aa8.39□□□□□ -1.07
VCAN-202ENST00000342785 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms