RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PRR5LQ6MZQ0 368 aa19.06■□□□□ 0.64
ERCC1-203ENST00000340192 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
ERCC1-203ENST00000340192 CCDC24Q8N4L8 307 aa19.05■□□□□ 0.64
ERCC1-203ENST00000340192 CNBD1Q8NA66 436 aa19.05■□□□□ 0.64
ERCC1-203ENST00000340192 ZNF784Q8NCA9 323 aaPredicted RBP19.05■□□□□ 0.64
ERCC1-203ENST00000340192 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
ERCC1-203ENST00000340192 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 NPHP1O15259 732 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 ZNF853P0CG23 659 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
ERCC1-203ENST00000340192 PDIA6Q15084 440 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 DALRD3Q5D0E6 543 aaKnown RBP19.04■□□□□ 0.64
ERCC1-203ENST00000340192 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 NECTIN2Q92692 538 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 MBIPQ9NS73 344 aa19.04■□□□□ 0.64
ERCC1-203ENST00000340192 NIP7Q9Y221 180 aaKnown RBP eCLIP19.04■□□□□ 0.64
ERCC1-203ENST00000340192 MAP3K15Q6ZN16 1313 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 ERVV-1B6SEH8 477 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 PROSER3Q2NL68 480 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 NBPF5PQ86XG9 351 aaPredicted RBP19.03■□□□□ 0.64
ERCC1-203ENST00000340192 C2CD5Q86YS7 1000 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 BRIP1Q9BX63 1249 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
ERCC1-203ENST00000340192 H0YIN7 160 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 ANXA1P04083 346 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 PDE6BP35913 854 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 GNAI1P63096 354 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 ST5P78524 1137 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 ZBTB3Q9H5J0 574 aa19.02■□□□□ 0.64
ERCC1-203ENST00000340192 ARHGAP27Q6ZUM4 889 aa19.01■□□□□ 0.63
ERCC1-203ENST00000340192 HOXB7P09629 217 aa19■□□□□ 0.63
ERCC1-203ENST00000340192 CACNA1SQ13698 1873 aa19■□□□□ 0.63
ERCC1-203ENST00000340192 ATP10DQ9P241 1426 aa19■□□□□ 0.63
ERCC1-203ENST00000340192 FAM177BA6PVY3 158 aa18.99■□□□□ 0.63
ERCC1-203ENST00000340192 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
ERCC1-203ENST00000340192 HDGFL1Q5TGJ6 251 aa18.99■□□□□ 0.63
ERCC1-203ENST00000340192 DUSP27Q5VZP5 1158 aa18.99■□□□□ 0.63
ERCC1-203ENST00000340192 TPTE2Q6XPS3 522 aa18.99■□□□□ 0.63
ERCC1-203ENST00000340192 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 ADCY9O60503 1353 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 WWC1Q8IX03 1113 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 TTLL6Q8N841 843 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
ERCC1-203ENST00000340192 CHPF2Q9P2E5 772 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 PDZRN3Q9UPQ7 1066 aa18.98■□□□□ 0.63
ERCC1-203ENST00000340192 GIGYF2Q6Y7W6 1299 aaKnown RBP18.97■□□□□ 0.63
ERCC1-203ENST00000340192 COPS6Q7L5N1 327 aa18.97■□□□□ 0.63
ERCC1-203ENST00000340192 XAGE3Q8WTP9 111 aa18.97■□□□□ 0.63
ERCC1-203ENST00000340192 ZNF622Q969S3 477 aaKnown RBP eCLIP18.97■□□□□ 0.63
ERCC1-203ENST00000340192 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 GPTP24298 496 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 AIMP1Q12904 312 aaKnown RBP18.96■□□□□ 0.63
ERCC1-203ENST00000340192 ZNF34Q8IZ26 560 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 FAM9BQ8IZU0 186 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 SBF1O95248 1867 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 UBN2Q6ZU65 1347 aa18.96■□□□□ 0.63
ERCC1-203ENST00000340192 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
ERCC1-203ENST00000340192 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
ERCC1-203ENST00000340192 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
ERCC1-203ENST00000340192 NYXQ9GZU5 481 aa18.95■□□□□ 0.62
ERCC1-203ENST00000340192 DBF4Q9UBU7 674 aaPredicted RBP18.95■□□□□ 0.62
ERCC1-203ENST00000340192 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
ERCC1-203ENST00000340192 SRGNP10124 158 aa18.94■□□□□ 0.62
ERCC1-203ENST00000340192 GTF2E1P29083 439 aaPredicted RBP18.94■□□□□ 0.62
ERCC1-203ENST00000340192 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
ERCC1-203ENST00000340192 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
ERCC1-203ENST00000340192 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
ERCC1-203ENST00000340192 NUTM1Q86Y26 1132 aa18.93■□□□□ 0.62
ERCC1-203ENST00000340192 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
ERCC1-203ENST00000340192 MASTLQ96GX5 879 aa18.93■□□□□ 0.62
ERCC1-203ENST00000340192 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
ERCC1-203ENST00000340192 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
ERCC1-203ENST00000340192 KLRG2A4D1S0 409 aaPredicted RBP18.92■□□□□ 0.62
ERCC1-203ENST00000340192 ERFEQ4G0M1 354 aa18.92■□□□□ 0.62
ERCC1-203ENST00000340192 SUSD4Q5VX71 490 aa18.92■□□□□ 0.62
ERCC1-203ENST00000340192 IL16Q14005 1332 aa18.92■□□□□ 0.62
ERCC1-203ENST00000340192 CCDC88AQ3V6T2 1871 aa18.91■□□□□ 0.62
ERCC1-203ENST00000340192 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
ERCC1-203ENST00000340192 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
ERCC1-203ENST00000340192 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 NTSR2O95665 410 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 RASSF7Q02833 373 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 PARP10Q53GL7 1025 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 C9orf131Q5VYM1 1079 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
ERCC1-203ENST00000340192 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
ERCC1-203ENST00000340192 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
ERCC1-203ENST00000340192 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
ERCC1-203ENST00000340192 C21orf2O43822 256 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 NPR1P16066 1061 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 TSPYL6Q8N831 410 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 RIC1Q4ADV7 1423 aa18.89■□□□□ 0.61
ERCC1-203ENST00000340192 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
ERCC1-203ENST00000340192 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
ERCC1-203ENST00000340192 CRY2Q49AN0 593 aa18.87■□□□□ 0.61
ERCC1-203ENST00000340192 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms