RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 KIF20BQ96Q89 1820 aa19.78■□□□□ 0.76
PRDM8-201ENST00000339711 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
PRDM8-201ENST00000339711 CNNM1Q9NRU3 951 aa19.78■□□□□ 0.76
PRDM8-201ENST00000339711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.76
PRDM8-201ENST00000339711 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
PRDM8-201ENST00000339711 C1orf167Q5SNV9 1468 aa19.77■□□□□ 0.75
PRDM8-201ENST00000339711 MCM4P33991 863 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 VPS37CA5D8V6 355 aaPredicted RBP19.76■□□□□ 0.75
PRDM8-201ENST00000339711 NRDCO43847 1150 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 USP16Q9Y5T5 823 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 PSMA5P28066 241 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 CRB1P82279 1406 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 GOLGA6L6A8MZA4 724 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 CCDC158Q5M9N0 1113 aa19.76■□□□□ 0.75
PRDM8-201ENST00000339711 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 GPTP24298 496 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 PROSER3Q2NL68 480 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 CWC22Q9HCG8 908 aaKnown RBP19.75■□□□□ 0.75
PRDM8-201ENST00000339711 FAM13BQ9NYF5 915 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
PRDM8-201ENST00000339711 BICC1Q9H694 974 aaKnown RBP19.75■□□□□ 0.75
PRDM8-201ENST00000339711 APPP05067 770 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 BEND3Q5T5X7 828 aa19.75■□□□□ 0.75
PRDM8-201ENST00000339711 LMBR1LQ6UX01 489 aa19.74■□□□□ 0.75
PRDM8-201ENST00000339711 ESYT1Q9BSJ8 1104 aa19.74■□□□□ 0.75
PRDM8-201ENST00000339711 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
PRDM8-201ENST00000339711 ATP6V1DQ9Y5K8 247 aa19.74■□□□□ 0.75
PRDM8-201ENST00000339711 PRPF40AO75400 957 aaKnown RBP19.74■□□□□ 0.75
PRDM8-201ENST00000339711 CYP46A1Q9Y6A2 500 aa19.73■□□□□ 0.75
PRDM8-201ENST00000339711 GSPT1P15170 499 aaKnown RBP19.73■□□□□ 0.75
PRDM8-201ENST00000339711 MRE11P49959 708 aa19.73■□□□□ 0.75
PRDM8-201ENST00000339711 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
PRDM8-201ENST00000339711 TOMM22Q9NS69 142 aa19.73■□□□□ 0.75
PRDM8-201ENST00000339711 RBM25P49756 843 aaKnown RBP19.73■□□□□ 0.75
PRDM8-201ENST00000339711 FAM43AQ8N2R8 423 aa19.73■□□□□ 0.75
PRDM8-201ENST00000339711 NGLY1Q96IV0 654 aa19.73■□□□□ 0.75
PRDM8-201ENST00000339711 NASPP49321 788 aaPredicted RBP19.72■□□□□ 0.75
PRDM8-201ENST00000339711 FOSBP53539 338 aa19.72■□□□□ 0.75
PRDM8-201ENST00000339711 FKBP4Q02790 459 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRDM8-201ENST00000339711 TTC39AQ5SRH9 613 aa19.72■□□□□ 0.75
PRDM8-201ENST00000339711 EVI5LQ96CN4 794 aa19.72■□□□□ 0.75
PRDM8-201ENST00000339711 SSH3Q8TE77 659 aa19.72■□□□□ 0.75
PRDM8-201ENST00000339711 JAKMIP1Q96N16 626 aaKnown RBP19.72■□□□□ 0.75
PRDM8-201ENST00000339711 LMTK3Q96Q04 1460 aa19.72■□□□□ 0.75
PRDM8-201ENST00000339711 A1BGP04217 495 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.71■□□□□ 0.75
PRDM8-201ENST00000339711 C3P01024 1663 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 SNX21Q969T3 373 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 KIF3AQ9Y496 699 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 ADGRB2O60241 1585 aa19.71■□□□□ 0.75
PRDM8-201ENST00000339711 IFIT5Q13325 482 aaKnown RBP19.71■□□□□ 0.75
PRDM8-201ENST00000339711 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
PRDM8-201ENST00000339711 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
PRDM8-201ENST00000339711 SUCLG2Q96I99 432 aa19.7■□□□□ 0.74
PRDM8-201ENST00000339711 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
PRDM8-201ENST00000339711 TOM1O60784 492 aa19.7■□□□□ 0.74
PRDM8-201ENST00000339711 HSP90AB3PQ58FF7 597 aa19.7■□□□□ 0.74
PRDM8-201ENST00000339711 CSPP1Q1MSJ5 1256 aa19.7■□□□□ 0.74
PRDM8-201ENST00000339711 CHMLP26374 656 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 H3BQV1 296 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 GCKRQ14397 625 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 VPS37DQ86XT2 251 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 PLBD2Q8NHP8 589 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 WDR17Q8IZU2 1322 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 MPHOSPH8Q99549 860 aa19.69■□□□□ 0.74
PRDM8-201ENST00000339711 PHF14O94880 888 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 CASTP20810 708 aaKnown RBP19.68■□□□□ 0.74
PRDM8-201ENST00000339711 DDB1Q16531 1140 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 METTL24Q5JXM2 366 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 FBXW7Q969H0 707 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 SF3A1Q15459 793 aaKnown RBP19.68■□□□□ 0.74
PRDM8-201ENST00000339711 KLHDC4Q8TBB5 520 aa19.68■□□□□ 0.74
PRDM8-201ENST00000339711 BLOC1S2Q6QNY1 142 aa19.67■□□□□ 0.74
PRDM8-201ENST00000339711 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
PRDM8-201ENST00000339711 ACSBG1Q96GR2 724 aa19.67■□□□□ 0.74
PRDM8-201ENST00000339711 CYP27B1O15528 508 aa19.67■□□□□ 0.74
PRDM8-201ENST00000339711 TRDNQ13061 729 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 CARD10Q9BWT7 1032 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 PDRG1Q9NUG6 133 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.66■□□□□ 0.74
PRDM8-201ENST00000339711 IFIT1P09914 478 aaKnown RBP19.66■□□□□ 0.74
PRDM8-201ENST00000339711 AKAP2Q9Y2D5 859 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 SSH2Q76I76 1423 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
PRDM8-201ENST00000339711 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 UBAP1LF5GYI3 381 aa19.66■□□□□ 0.74
PRDM8-201ENST00000339711 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
PRDM8-201ENST00000339711 TNPO1Q92973 898 aaKnown RBP19.65■□□□□ 0.74
PRDM8-201ENST00000339711 RALYLQ86SE5 291 aaKnown RBP19.64■□□□□ 0.74
PRDM8-201ENST00000339711 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.74
PRDM8-201ENST00000339711 R3HCC1Q9Y3T6 440 aaKnown RBP19.64■□□□□ 0.74
PRDM8-201ENST00000339711 IBTKQ9P2D0 1353 aaPredicted RBP19.64■□□□□ 0.73
PRDM8-201ENST00000339711 CREBRFQ8IUR6 639 aa19.64■□□□□ 0.73
PRDM8-201ENST00000339711 NRXN3Q9Y4C0 1643 aa19.64■□□□□ 0.73
PRDM8-201ENST00000339711 TNS3Q68CZ2 1445 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms