RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 BBXQ8WY36 941 aaPredicted RBP21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 UBAC1Q9BSL1 405 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 GOLGA8BA8MQT2 603 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 IFIT1P09914 478 aaKnown RBP21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 RBM25P49756 843 aaKnown RBP21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 TYRO3Q06418 890 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 NACAP1Q9BZK3 213 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 STRN4Q9NRL3 753 aa21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
NPLOC4-201ENST00000331134 AK2P54819 239 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 HS1BP3Q53T59 392 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 RBM33Q96EV2 1170 aaKnown RBP21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 PAXBP1Q9Y5B6 917 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 PRAG1Q86YV5 1406 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 GOLGA6L10A6NI86 522 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 NEMFO60524 1076 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 GOLIM4O00461 696 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 GSDMDP57764 484 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 STIM1Q13586 685 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 EVI5LQ96CN4 794 aa21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 RBM8AQ9Y5S9 174 aaKnown RBP21.98■■□□□ 1.11
NPLOC4-201ENST00000331134 TAX1BP1Q86VP1 789 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 NEK1Q96PY6 1258 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 DDX46Q7L014 1031 aaKnown RBP21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 TCEAL9Q9UHQ7 104 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 LIG1P18858 919 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 ABCF2Q9UG63 623 aa21.97■■□□□ 1.11
NPLOC4-201ENST00000331134 LMOD1P29536 600 aaPredicted RBP21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 MCM6Q14566 821 aa21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 ORC3Q9UBD5 711 aaPredicted RBP21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 USP16Q9Y5T5 823 aa21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 SYT1P21579 422 aa21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 AOPEPQ8N6M6 819 aa21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 KRT18P05783 430 aaKnown RBP21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 IQGAP2Q13576 1575 aa21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 ZBTB7BO15156 539 aaPredicted RBP21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 ENOX2Q16206 610 aaKnown RBP21.96■■□□□ 1.11
NPLOC4-201ENST00000331134 PRM3Q9NNZ6 103 aa21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 CCDC12Q8WUD4 166 aaPredicted RBP21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 CCDC43Q96MW1 224 aaKnown RBP21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 TIGD1Q96MW7 591 aa21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 IPO4Q8TEX9 1081 aaKnown RBP21.95■■□□□ 1.1
NPLOC4-201ENST00000331134 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.17e-7■■□□□ 14.2
NPLOC4-201ENST00000331134 AIDAQ96BJ3 306 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 MAP3K2Q9Y2U5 619 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 IKQ13123 557 aaPredicted RBP21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 PA2G4Q9UQ80 394 aaKnown RBP21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 PKP1Q13835 747 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 TMEM63CQ9P1W3 806 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 MPHOSPH8Q99549 860 aa21.94■■□□□ 1.1
NPLOC4-201ENST00000331134 ATF3P18847 181 aa21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 ATP2B2Q01814 1243 aa21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 MICU3Q86XE3 530 aa21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 GADD45BO75293 160 aaPredicted RBP21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
NPLOC4-201ENST00000331134 A0A087WZG4 1122 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 ANAPC15P60006 121 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 WASLO00401 505 aaPredicted RBP21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 UBE3BQ7Z3V4 1068 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 POLKQ9UBT6 870 aa21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 DBF4Q9UBU7 674 aaPredicted RBP21.92■■□□□ 1.1
NPLOC4-201ENST00000331134 LMBRD1Q9NUN5 540 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 METTL24Q5JXM2 366 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 CCDC148Q8NFR7 591 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 NUP88Q99567 741 aaPredicted RBP21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 GBP3Q9H0R5 595 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 RIOK3O14730 519 aaKnown RBP21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 CHMLP26374 656 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 MARCKSP29966 332 aaPredicted RBP21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 UBASH3AP57075 661 aa21.91■■□□□ 1.1
NPLOC4-201ENST00000331134 CHST3Q7LGC8 479 aa21.9■■□□□ 1.1
NPLOC4-201ENST00000331134 FOXO3O43524 673 aa21.9■■□□□ 1.1
NPLOC4-201ENST00000331134 GTF3C6Q969F1 213 aa21.9■■□□□ 1.1
NPLOC4-201ENST00000331134 ZNF213O14771 459 aa21.9■■□□□ 1.1
NPLOC4-201ENST00000331134 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-201ENST00000331134 SLU7O95391 586 aaKnown RBP21.89■■□□□ 1.1
NPLOC4-201ENST00000331134 CCDC171Q6TFL3 1326 aa21.89■■□□□ 1.09
NPLOC4-201ENST00000331134 PHACTR2O75167 634 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 MATR3P43243 847 aaKnown RBP eCLIP21.88■■□□□ 1.092e-8■■■■■ 31.3
NPLOC4-201ENST00000331134 ATP8B2P98198 1209 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 SYT10Q6XYQ8 523 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 GPATCH11Q8N954 259 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 ZSCAN25Q6NSZ9 544 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 HMGB1P09429 215 aaKnown RBP21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 ZNF445P59923 1031 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 TOM1L2Q6ZVM7 507 aa21.88■■□□□ 1.09
NPLOC4-201ENST00000331134 NAPBQ9H115 298 aa21.87■■□□□ 1.09
NPLOC4-201ENST00000331134 ARFGAP3Q9NP61 516 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms