RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
RAB28-202ENST00000330852 ZNF622Q969S3 477 aaKnown RBP eCLIP23.86■■□□□ 1.412e-6■□□□□ 10.3
RAB28-202ENST00000330852 COL11A2P13942 1736 aaPredicted RBP23.86■■□□□ 1.41
RAB28-202ENST00000330852 STYK1Q6J9G0 422 aa23.85■■□□□ 1.41
RAB28-202ENST00000330852 NBPF5PQ86XG9 351 aaPredicted RBP23.85■■□□□ 1.41
RAB28-202ENST00000330852 CNKSR1Q969H4 720 aa23.85■■□□□ 1.41
RAB28-202ENST00000330852 TPTE2Q6XPS3 522 aa23.84■■□□□ 1.41
RAB28-202ENST00000330852 ARFGEF2Q9Y6D5 1785 aa23.84■■□□□ 1.41
RAB28-202ENST00000330852 RIPK4P57078 832 aa23.84■■□□□ 1.41
RAB28-202ENST00000330852 THUMPD2Q9BTF0 503 aaKnown RBP23.84■■□□□ 1.41
RAB28-202ENST00000330852 FER1L6Q2WGJ9 1857 aa23.83■■□□□ 1.41
RAB28-202ENST00000330852 ERVV-1B6SEH8 477 aa23.83■■□□□ 1.41
RAB28-202ENST00000330852 NMRK2Q9NPI5 230 aa23.83■■□□□ 1.41
RAB28-202ENST00000330852 TNRC6CQ9HCJ0 1690 aaKnown RBP23.83■■□□□ 1.4
RAB28-202ENST00000330852 ERBB4Q15303 1308 aa23.83■■□□□ 1.4
RAB28-202ENST00000330852 NUP98P52948 1817 aa23.83■■□□□ 1.4
RAB28-202ENST00000330852 SRGNP10124 158 aa23.82■■□□□ 1.4
RAB28-202ENST00000330852 MASTLQ96GX5 879 aa23.82■■□□□ 1.4
RAB28-202ENST00000330852 NIP7Q9Y221 180 aaKnown RBP eCLIP23.82■■□□□ 1.4
RAB28-202ENST00000330852 DICER1Q9UPY3 1922 aaKnown RBP23.82■■□□□ 1.4
RAB28-202ENST00000330852 TMPOP42166 694 aaKnown RBP23.81■■□□□ 1.4
RAB28-202ENST00000330852 RASSF7Q02833 373 aa23.81■■□□□ 1.4
RAB28-202ENST00000330852 CCDC24Q8N4L8 307 aa23.81■■□□□ 1.4
RAB28-202ENST00000330852 SOGA3Q5TF21 947 aa23.81■■□□□ 1.4
RAB28-202ENST00000330852 TSPYL4Q9UJ04 414 aa23.8■■□□□ 1.4
RAB28-202ENST00000330852 SLX4Q8IY92 1834 aa23.8■■□□□ 1.4
RAB28-202ENST00000330852 CACNA1SQ13698 1873 aa23.8■■□□□ 1.4
RAB28-202ENST00000330852 KLRG2A4D1S0 409 aaPredicted RBP23.79■■□□□ 1.4
RAB28-202ENST00000330852 NFKBIEO00221 500 aa23.79■■□□□ 1.4
RAB28-202ENST00000330852 C16orf71Q8IYS4 520 aaPredicted RBP23.79■■□□□ 1.4
RAB28-202ENST00000330852 RBM46Q8TBY0 533 aaKnown RBP23.79■■□□□ 1.4
RAB28-202ENST00000330852 C21orf2O43822 256 aa23.79■■□□□ 1.4
RAB28-202ENST00000330852 LTBP3Q9NS15 1303 aa23.78■■□□□ 1.4
RAB28-202ENST00000330852 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
RAB28-202ENST00000330852 HLFQ16534 295 aa23.78■■□□□ 1.4
RAB28-202ENST00000330852 KIF6Q6ZMV9 814 aa23.78■■□□□ 1.4
RAB28-202ENST00000330852 RRP7AQ9Y3A4 280 aaKnown RBP23.78■■□□□ 1.4
RAB28-202ENST00000330852 MAP3K15Q6ZN16 1313 aa23.78■■□□□ 1.4
RAB28-202ENST00000330852 NPR1P16066 1061 aa23.77■■□□□ 1.4
RAB28-202ENST00000330852 NYXQ9GZU5 481 aa23.77■■□□□ 1.4
RAB28-202ENST00000330852 TIAM2Q8IVF5 1701 aa23.77■■□□□ 1.4
RAB28-202ENST00000330852 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
RAB28-202ENST00000330852 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
RAB28-202ENST00000330852 GLTPD2A6NH11 291 aa23.76■■□□□ 1.39
RAB28-202ENST00000330852 PRELPP51888 382 aa23.76■■□□□ 1.39
RAB28-202ENST00000330852 GTF2E1P29083 439 aaPredicted RBP23.75■■□□□ 1.39
RAB28-202ENST00000330852 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
RAB28-202ENST00000330852 APLP1P51693 650 aa23.74■■□□□ 1.39
RAB28-202ENST00000330852 FSTL1Q12841 308 aa23.74■■□□□ 1.39
RAB28-202ENST00000330852 TAOK3Q9H2K8 898 aa23.74■■□□□ 1.39
RAB28-202ENST00000330852 RRAGCQ9HB90 399 aa23.74■■□□□ 1.39
RAB28-202ENST00000330852 MYL6BP14649 208 aa23.73■■□□□ 1.39
RAB28-202ENST00000330852 PRKRIP1Q9H875 184 aaPredicted RBP23.73■■□□□ 1.39
RAB28-202ENST00000330852 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
RAB28-202ENST00000330852 IBTKQ9P2D0 1353 aaPredicted RBP23.73■■□□□ 1.39
RAB28-202ENST00000330852 DPY19L2Q6NUT2 758 aa23.73■■□□□ 1.39
RAB28-202ENST00000330852 TTLL7Q6ZT98 887 aa23.73■■□□□ 1.39
RAB28-202ENST00000330852 ALDH1B1P30837 517 aa23.72■■□□□ 1.39
RAB28-202ENST00000330852 ZNF219Q9P2Y4 722 aaPredicted RBP23.72■■□□□ 1.39
RAB28-202ENST00000330852 VEGFAP15692 232 aaPredicted RBP23.71■■□□□ 1.39
RAB28-202ENST00000330852 C7orf43Q8WVR3 580 aa23.71■■□□□ 1.39
RAB28-202ENST00000330852 ERFEQ4G0M1 354 aa23.7■■□□□ 1.39
RAB28-202ENST00000330852 GIGYF2Q6Y7W6 1299 aaKnown RBP23.7■■□□□ 1.39
RAB28-202ENST00000330852 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.39
RAB28-202ENST00000330852 RIC1Q4ADV7 1423 aa23.7■■□□□ 1.38
RAB28-202ENST00000330852 FAM177BA6PVY3 158 aa23.7■■□□□ 1.38
RAB28-202ENST00000330852 CHL1O00533 1208 aa23.7■■□□□ 1.38
RAB28-202ENST00000330852 CCDC93Q567U6 631 aa23.7■■□□□ 1.38
RAB28-202ENST00000330852 ADAMTS8Q9UP79 889 aa23.7■■□□□ 1.38
RAB28-202ENST00000330852 NEUROD2Q15784 382 aa23.69■■□□□ 1.38
RAB28-202ENST00000330852 ZNF34Q8IZ26 560 aa23.69■■□□□ 1.38
RAB28-202ENST00000330852 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
RAB28-202ENST00000330852 PDIA6Q15084 440 aa23.68■■□□□ 1.38
RAB28-202ENST00000330852 CRY2Q49AN0 593 aa23.68■■□□□ 1.38
RAB28-202ENST00000330852 ZBTB3Q9H5J0 574 aa23.68■■□□□ 1.38
RAB28-202ENST00000330852 TRIM35Q9UPQ4 493 aa23.68■■□□□ 1.38
RAB28-202ENST00000330852 WDR90Q96KV7 1748 aa23.68■■□□□ 1.38
RAB28-202ENST00000330852 PARP10Q53GL7 1025 aa23.67■■□□□ 1.38
RAB28-202ENST00000330852 LRP10Q7Z4F1 713 aa23.67■■□□□ 1.38
RAB28-202ENST00000330852 RTKN2Q8IZC4 609 aa23.67■■□□□ 1.38
RAB28-202ENST00000330852 SMC1BQ8NDV3 1235 aa23.67■■□□□ 1.38
RAB28-202ENST00000330852 PPP1R42Q7Z4L9 355 aa23.66■■□□□ 1.38
RAB28-202ENST00000330852 UBN2Q6ZU65 1347 aa23.65■■□□□ 1.38
RAB28-202ENST00000330852 GPTP24298 496 aa23.64■■□□□ 1.38
RAB28-202ENST00000330852 CC2D2BQ6DHV5 1058 aa23.64■■□□□ 1.38
RAB28-202ENST00000330852 HOXB7P09629 217 aa23.64■■□□□ 1.37
RAB28-202ENST00000330852 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.37
RAB28-202ENST00000330852 FKBP4Q02790 459 aaKnown RBP eCLIP23.64■■□□□ 1.37
RAB28-202ENST00000330852 HSP90AB3PQ58FF7 597 aa23.64■■□□□ 1.37
RAB28-202ENST00000330852 SUSD4Q5VX71 490 aa23.64■■□□□ 1.37
RAB28-202ENST00000330852 NUTM1Q86Y26 1132 aa23.64■■□□□ 1.37
RAB28-202ENST00000330852 DDX21Q9NR30 783 aaKnown RBP eCLIP23.64■■□□□ 1.37
RAB28-202ENST00000330852 ABCC12Q96J65 1359 aa23.63■■□□□ 1.37
RAB28-202ENST00000330852 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
RAB28-202ENST00000330852 GRIPAP1Q4V328 841 aa23.63■■□□□ 1.37
RAB28-202ENST00000330852 RNF123Q5XPI4 1314 aa23.63■■□□□ 1.37
RAB28-202ENST00000330852 RPGRQ92834 1020 aaKnown RBP23.62■■□□□ 1.37
RAB28-202ENST00000330852 CFAP44Q96MT7 982 aa23.62■■□□□ 1.37
RAB28-202ENST00000330852 NTSR2O95665 410 aa23.62■■□□□ 1.37
RAB28-202ENST00000330852 ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms