RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
GTF3C6-201ENST00000329970 ST5P78524 1137 aa17.91■□□□□ 0.46
GTF3C6-201ENST00000329970 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
GTF3C6-201ENST00000329970 RNF181Q9P0P0 153 aa17.91■□□□□ 0.46
GTF3C6-201ENST00000329970 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
GTF3C6-201ENST00000329970 LMOD3Q0VAK6 560 aa17.9■□□□□ 0.46
GTF3C6-201ENST00000329970 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
GTF3C6-201ENST00000329970 STYK1Q6J9G0 422 aa17.89■□□□□ 0.45
GTF3C6-201ENST00000329970 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
GTF3C6-201ENST00000329970 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 TOMM70O94826 608 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 SRGNP10124 158 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 HSPA6P17066 643 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 LMNB1P20700 586 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 RIPK4P57078 832 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
GTF3C6-201ENST00000329970 KLRG2A4D1S0 409 aaPredicted RBP17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 RASSF7Q02833 373 aa17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 TPTE2Q6XPS3 522 aa17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 MASTLQ96GX5 879 aa17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
GTF3C6-201ENST00000329970 NFKBIEO00221 500 aa17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 NPHP1O15259 732 aa17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
GTF3C6-201ENST00000329970 PRELPP51888 382 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 SOGA3Q5TF21 947 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 MAP3K15Q6ZN16 1313 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
GTF3C6-201ENST00000329970 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 HLFQ16534 295 aa17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
GTF3C6-201ENST00000329970 NYXQ9GZU5 481 aa17.83■□□□□ 0.44
GTF3C6-201ENST00000329970 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 C21orf2O43822 256 aa17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 NPR1P16066 1061 aa17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
GTF3C6-201ENST00000329970 C7orf43Q8WVR3 580 aa17.81■□□□□ 0.44
GTF3C6-201ENST00000329970 RRP7AQ9Y3A4 280 aaKnown RBP17.81■□□□□ 0.44
GTF3C6-201ENST00000329970 CHL1O00533 1208 aa17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 FSTL1Q12841 308 aa17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 PDIA6Q15084 440 aa17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
GTF3C6-201ENST00000329970 MYL6BP14649 208 aa17.79■□□□□ 0.44
GTF3C6-201ENST00000329970 CRY2Q49AN0 593 aa17.79■□□□□ 0.44
GTF3C6-201ENST00000329970 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
GTF3C6-201ENST00000329970 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
GTF3C6-201ENST00000329970 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
GTF3C6-201ENST00000329970 APLP1P51693 650 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
GTF3C6-201ENST00000329970 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
GTF3C6-201ENST00000329970 HOXB7P09629 217 aa17.77■□□□□ 0.44
GTF3C6-201ENST00000329970 ALDH1B1P30837 517 aa17.77■□□□□ 0.44
GTF3C6-201ENST00000329970 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
GTF3C6-201ENST00000329970 SCN4AP35499 1836 aa17.77■□□□□ 0.43
GTF3C6-201ENST00000329970 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 VEGFAP15692 232 aaPredicted RBP17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 PARP10Q53GL7 1025 aa17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
GTF3C6-201ENST00000329970 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
GTF3C6-201ENST00000329970 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
GTF3C6-201ENST00000329970 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
GTF3C6-201ENST00000329970 LAMB2P55268 1798 aa17.75■□□□□ 0.43
GTF3C6-201ENST00000329970 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 NTSR2O95665 410 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 EIF2S2P20042 333 aaKnown RBP17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
GTF3C6-201ENST00000329970 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
GTF3C6-201ENST00000329970 HSP90AB3PQ58FF7 597 aa17.73■□□□□ 0.43
GTF3C6-201ENST00000329970 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
GTF3C6-201ENST00000329970 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
GTF3C6-201ENST00000329970 POTECB2RU33 542 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms