RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DEFB123Q8N688 67 aa9.63□□□□□ -0.87
CSTF3-201ENST00000323959 MTMR10Q9NXD2 777 aa9.63□□□□□ -0.87
CSTF3-201ENST00000323959 SRP68Q9UHB9 627 aaKnown RBP9.63□□□□□ -0.87
CSTF3-201ENST00000323959 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
CSTF3-201ENST00000323959 FKTNO75072 461 aa9.62□□□□□ -0.87
CSTF3-201ENST00000323959 ADARB2Q9NS39 739 aaKnown RBP9.62□□□□□ -0.87
CSTF3-201ENST00000323959 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
CSTF3-201ENST00000323959 RPTORQ8N122 1335 aa9.62□□□□□ -0.87
CSTF3-201ENST00000323959 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 GPR25O00155 361 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.875e-17■■□□□ 12.5
CSTF3-201ENST00000323959 TNFRSF10AO00220 468 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 SERPINB2P05120 415 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 EIF6P56537 245 aaKnown RBP9.61□□□□□ -0.87
CSTF3-201ENST00000323959 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 RAPGEFL1Q9UHV5 662 aa9.61□□□□□ -0.87
CSTF3-201ENST00000323959 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 ATG3Q9NT62 314 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
CSTF3-201ENST00000323959 CYP27B1O15528 508 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 MAP3K12Q12852 859 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 ASAP1Q9ULH1 1129 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 CACNA1SQ13698 1873 aa9.6□□□□□ -0.87
CSTF3-201ENST00000323959 CDC37L1Q7L3B6 337 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 MRC1P22897 1456 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 CDHR2Q9BYE9 1310 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 ZPR1O75312 459 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
CSTF3-201ENST00000323959 SCNN1DP51172 638 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 NFIXQ14938 502 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 RTKN2Q8IZC4 609 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 CARMIL3Q8ND23 1372 aa9.59□□□□□ -0.87
CSTF3-201ENST00000323959 ZNF157P51786 506 aaPredicted RBP9.58□□□□□ -0.88
CSTF3-201ENST00000323959 C2orf69Q8N8R5 385 aa9.58□□□□□ -0.88
CSTF3-201ENST00000323959 TJP1Q07157 1748 aa9.58□□□□□ -0.88
CSTF3-201ENST00000323959 LTV1Q96GA3 475 aaPredicted RBP9.58□□□□□ -0.88
CSTF3-201ENST00000323959 P2RX7Q99572 595 aaKnown RBP9.58□□□□□ -0.88
CSTF3-201ENST00000323959 GLIS2Q9BZE0 524 aaPredicted RBP9.58□□□□□ -0.88
CSTF3-201ENST00000323959 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
CSTF3-201ENST00000323959 EPS15P42566 896 aa9.57□□□□□ -0.88
CSTF3-201ENST00000323959 GBA2Q9HCG7 927 aaPredicted RBP9.57□□□□□ -0.88
CSTF3-201ENST00000323959 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
CSTF3-201ENST00000323959 ANKRD26Q9UPS8 1709 aa9.57□□□□□ -0.88
CSTF3-201ENST00000323959 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
CSTF3-201ENST00000323959 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
CSTF3-201ENST00000323959 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
CSTF3-201ENST00000323959 ZNF609O15014 1411 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 TMEM265A0A087WTH1 108 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 JDP2Q8WYK2 163 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 HTATIP2Q9BUP3 242 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 KDM3BQ7LBC6 1761 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 HOXC9P31274 260 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 FAM109BQ6ICB4 259 aaPredicted RBP9.56□□□□□ -0.88
CSTF3-201ENST00000323959 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 ZNF408Q9H9D4 720 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 CACNA1AO00555 2505 aa9.56□□□□□ -0.88
CSTF3-201ENST00000323959 BMP8BP34820 402 aa9.55□□□□□ -0.88
CSTF3-201ENST00000323959 NARFQ9UHQ1 456 aa9.55□□□□□ -0.88
CSTF3-201ENST00000323959 MASTLQ96GX5 879 aa9.55□□□□□ -0.88
CSTF3-201ENST00000323959 ZNF277Q9NRM2 450 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-201ENST00000323959 GJA3Q9Y6H8 435 aa9.55□□□□□ -0.88
CSTF3-201ENST00000323959 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
CSTF3-201ENST00000323959 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 USPL1Q5W0Q7 1092 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 PTPN22Q9Y2R2 807 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 GPRC5DQ9NZD1 345 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
CSTF3-201ENST00000323959 OTOP1Q7RTM1 612 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 PSMD1Q99460 953 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 SOS1Q07889 1333 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-201ENST00000323959 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 TBC1D8O95759 1140 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 ITGAEP38570 1179 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 DPF3Q92784 378 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 ZNF333Q96JL9 665 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 PCGF6Q9BYE7 350 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■□ 19.6
CSTF3-201ENST00000323959 HCN4Q9Y3Q4 1203 aa9.53□□□□□ -0.88
CSTF3-201ENST00000323959 ZNF646O15015 1829 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-201ENST00000323959 TM4SF4P48230 202 aa9.52□□□□□ -0.88
CSTF3-201ENST00000323959 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.88
CSTF3-201ENST00000323959 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.88
CSTF3-201ENST00000323959 NBPF4Q96M43 638 aa9.52□□□□□ -0.88
CSTF3-201ENST00000323959 A0A1W2PP64 1363 aa9.52□□□□□ -0.89
CSTF3-201ENST00000323959 EDC4Q6P2E9 1401 aaKnown RBP9.52□□□□□ -0.89
CSTF3-201ENST00000323959 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
CSTF3-201ENST00000323959 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
CSTF3-201ENST00000323959 TONSLQ96HA7 1378 aa9.52□□□□□ -0.89
CSTF3-201ENST00000323959 SBNO2Q9Y2G9 1366 aa9.52□□□□□ -0.89
CSTF3-201ENST00000323959 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
CSTF3-201ENST00000323959 SCN7AQ01118 1682 aa9.51□□□□□ -0.89
CSTF3-201ENST00000323959 SRGNP10124 158 aa9.51□□□□□ -0.89
CSTF3-201ENST00000323959 FKBP1BP68106 108 aa9.51□□□□□ -0.89
CSTF3-201ENST00000323959 FOXK2Q01167 660 aa9.51□□□□□ -0.89
CSTF3-201ENST00000323959 NME9Q86XW9 330 aa9.51□□□□□ -0.89
CSTF3-201ENST00000323959 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 683.1 ms