RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ERVV-1B6SEH8 477 aa27.89■■■□□ 2.06
UBE2D3-201ENST00000321805 NPHP1O15259 732 aa27.88■■■□□ 2.05
UBE2D3-201ENST00000321805 TTLL6Q8N841 843 aa27.88■■■□□ 2.05
UBE2D3-201ENST00000321805 CHL1O00533 1208 aa27.87■■■□□ 2.05
UBE2D3-201ENST00000321805 KIF6Q6ZMV9 814 aa27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 NBPF5PQ86XG9 351 aaPredicted RBP27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 GPBP1L1Q9HC44 474 aaPredicted RBP27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 NIP7Q9Y221 180 aaKnown RBP eCLIP27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 COL11A2P13942 1736 aaPredicted RBP27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 MAP3K15Q6ZN16 1313 aa27.86■■■□□ 2.05
UBE2D3-201ENST00000321805 NUP98P52948 1817 aa27.84■■■□□ 2.05
UBE2D3-201ENST00000321805 TPTE2Q6XPS3 522 aa27.83■■■□□ 2.05
UBE2D3-201ENST00000321805 MYL6BP14649 208 aa27.82■■■□□ 2.04
UBE2D3-201ENST00000321805 HLFQ16534 295 aa27.82■■■□□ 2.04
UBE2D3-201ENST00000321805 CFAP44Q96MT7 982 aa27.82■■■□□ 2.04
UBE2D3-201ENST00000321805 HOXB7P09629 217 aa27.81■■■□□ 2.04
UBE2D3-201ENST00000321805 C1QTNF8P60827 252 aa27.81■■■□□ 2.04
UBE2D3-201ENST00000321805 CALD1Q05682 793 aaKnown RBP27.81■■■□□ 2.04
UBE2D3-201ENST00000321805 IBTKQ9P2D0 1353 aaPredicted RBP27.81■■■□□ 2.04
UBE2D3-201ENST00000321805 APAF1O14727 1248 aa27.8■■■□□ 2.04
UBE2D3-201ENST00000321805 STYK1Q6J9G0 422 aa27.8■■■□□ 2.04
UBE2D3-201ENST00000321805 NGEFQ8N5V2 710 aa27.8■■■□□ 2.04
UBE2D3-201ENST00000321805 ARFGEF2Q9Y6D5 1785 aa27.8■■■□□ 2.04
UBE2D3-201ENST00000321805 SBF1O95248 1867 aa27.8■■■□□ 2.04
UBE2D3-201ENST00000321805 SRGNP10124 158 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 EIF2S2P20042 333 aaKnown RBP27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 PDIA6Q15084 440 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 C9orf131Q5VYM1 1079 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 TTLL7Q6ZT98 887 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 LRP10Q7Z4F1 713 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 CCDC24Q8N4L8 307 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 CNKSR1Q969H4 720 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 ZNF622Q969S3 477 aaKnown RBP eCLIP27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 NYXQ9GZU5 481 aa27.79■■■□□ 2.04
UBE2D3-201ENST00000321805 ANP32CO43423 234 aa27.78■■■□□ 2.04
UBE2D3-201ENST00000321805 MASTLQ96GX5 879 aa27.78■■■□□ 2.04
UBE2D3-201ENST00000321805 ZC3H4Q9UPT8 1303 aaKnown RBP27.77■■■□□ 2.04
UBE2D3-201ENST00000321805 KLRG2A4D1S0 409 aaPredicted RBP27.77■■■□□ 2.04
UBE2D3-201ENST00000321805 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
UBE2D3-201ENST00000321805 GIGYF2Q6Y7W6 1299 aaKnown RBP27.76■■■□□ 2.03
UBE2D3-201ENST00000321805 RIC1Q4ADV7 1423 aa27.75■■■□□ 2.03
UBE2D3-201ENST00000321805 ZNF526Q8TF50 670 aaPredicted RBP27.75■■■□□ 2.03
UBE2D3-201ENST00000321805 ZBTB3Q9H5J0 574 aa27.75■■■□□ 2.03
UBE2D3-201ENST00000321805 IFT57Q9NWB7 429 aa27.75■■■□□ 2.03
UBE2D3-201ENST00000321805 RNF181Q9P0P0 153 aa27.75■■■□□ 2.03
UBE2D3-201ENST00000321805 ZNF853P0CG23 659 aa27.74■■■□□ 2.03
UBE2D3-201ENST00000321805 DDX21Q9NR30 783 aaKnown RBP eCLIP27.74■■■□□ 2.03
UBE2D3-201ENST00000321805 NPR1P16066 1061 aa27.73■■■□□ 2.03
UBE2D3-201ENST00000321805 LMNB1P20700 586 aa27.73■■■□□ 2.03
UBE2D3-201ENST00000321805 GTF2E1P29083 439 aaPredicted RBP27.73■■■□□ 2.03
UBE2D3-201ENST00000321805 GNAI1P63096 354 aa27.73■■■□□ 2.03
UBE2D3-201ENST00000321805 SOGA3Q5TF21 947 aa27.73■■■□□ 2.03
UBE2D3-201ENST00000321805 PROSER3Q2NL68 480 aa27.72■■■□□ 2.03
UBE2D3-201ENST00000321805 CCDC184Q52MB2 194 aa27.72■■■□□ 2.03
UBE2D3-201ENST00000321805 ZNF34Q8IZ26 560 aa27.72■■■□□ 2.03
UBE2D3-201ENST00000321805 MBIPQ9NS73 344 aa27.72■■■□□ 2.03
UBE2D3-201ENST00000321805 FER1L6Q2WGJ9 1857 aa27.72■■■□□ 2.03
UBE2D3-201ENST00000321805 UBN2Q6ZU65 1347 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 RASSF7Q02833 373 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 CACNA1SQ13698 1873 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 KRT24Q2M2I5 525 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 PARP10Q53GL7 1025 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 HDGFL1Q5TGJ6 251 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 PRPF40BQ6NWY9 871 aaKnown RBP27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 SLX4Q8IY92 1834 aa27.71■■■□□ 2.03
UBE2D3-201ENST00000321805 FAM177BA6PVY3 158 aa27.7■■■□□ 2.02
UBE2D3-201ENST00000321805 NFKBIEO00221 500 aa27.7■■■□□ 2.02
UBE2D3-201ENST00000321805 HSP90AB3PQ58FF7 597 aa27.7■■■□□ 2.02
UBE2D3-201ENST00000321805 MRS2Q9HD23 443 aa27.7■■■□□ 2.02
UBE2D3-201ENST00000321805 ANKRD36CQ5JPF3 1778 aa27.7■■■□□ 2.02
UBE2D3-201ENST00000321805 LTBP3Q9NS15 1303 aa27.69■■■□□ 2.02
UBE2D3-201ENST00000321805 C21orf2O43822 256 aa27.69■■■□□ 2.02
UBE2D3-201ENST00000321805 NCBP3Q53F19 620 aaKnown RBP27.69■■■□□ 2.02
UBE2D3-201ENST00000321805 RNF123Q5XPI4 1314 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 ANXA1P04083 346 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 GPTP24298 496 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 CCDC27Q2M243 656 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 COPS6Q7L5N1 327 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 PPP1R42Q7Z4L9 355 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 ABCC12Q96J65 1359 aa27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 TNRC6CQ9HCJ0 1690 aaKnown RBP27.68■■■□□ 2.02
UBE2D3-201ENST00000321805 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 KIF3CO14782 793 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 CRY2Q49AN0 593 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 DUSP27Q5VZP5 1158 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 XAGE3Q8WTP9 111 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 NECTIN2Q92692 538 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 CHPF2Q9P2E5 772 aa27.67■■■□□ 2.02
UBE2D3-201ENST00000321805 NTSR2O95665 410 aa27.66■■■□□ 2.02
UBE2D3-201ENST00000321805 SUSD4Q5VX71 490 aa27.66■■■□□ 2.02
UBE2D3-201ENST00000321805 TIAM2Q8IVF5 1701 aa27.66■■■□□ 2.02
UBE2D3-201ENST00000321805 CCDC88AQ3V6T2 1871 aa27.66■■■□□ 2.02
UBE2D3-201ENST00000321805 ALDH1B1P30837 517 aa27.65■■■□□ 2.02
UBE2D3-201ENST00000321805 NUTM1Q86Y26 1132 aa27.65■■■□□ 2.02
UBE2D3-201ENST00000321805 CHMP4AQ9BY43 222 aa27.65■■■□□ 2.02
UBE2D3-201ENST00000321805 DICER1Q9UPY3 1922 aaKnown RBP27.65■■■□□ 2.02
UBE2D3-201ENST00000321805 ERFEQ4G0M1 354 aa27.64■■■□□ 2.02
UBE2D3-201ENST00000321805 TAOK3Q9H2K8 898 aa27.64■■■□□ 2.02
UBE2D3-201ENST00000321805 PRELPP51888 382 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms