RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 ANO6Q4KMQ2 910 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 SETBP1Q9Y6X0 1596 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 RAD50Q92878 1312 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 TNNT3P45378 269 aaPredicted RBP15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 EYA1Q99502 592 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 CCDC66A2RUB6 948 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 TYRO3Q06418 890 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 NCOA3Q9Y6Q9 1424 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 AOX1Q06278 1338 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 NSFL1CQ9UNZ2 370 aaKnown RBP15□□□□□ -0.01
DNMT3A-202ENST00000321117 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 FLT4P35916 1363 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 MYL6BP14649 208 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 VPS53Q5VIR6 699 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 CHD1O14646 1710 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 CUL4AQ13619 759 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 ARAP3Q8WWN8 1544 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 TTC41PQ6P2S7 1318 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 PTGS1P23219 599 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 SMAP1Q8IYB5 467 aaPredicted RBP15□□□□□ -0.01
DNMT3A-202ENST00000321117 ANO10Q9NW15 660 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
DNMT3A-202ENST00000321117 APPP05067 770 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 SSH2Q76I76 1423 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 CGNQ9P2M7 1197 aaKnown RBP14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 CTAGE5O15320 804 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 CAVIN2O95810 425 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 MPRIPQ6WCQ1 1025 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 GLI2P10070 1586 aa14.99□□□□□ -0.01
DNMT3A-202ENST00000321117 EPB41L2O43491 1005 aaKnown RBP14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 DHX16O60231 1041 aaKnown RBP14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 KIF18AQ8NI77 898 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 PDLIM2Q96JY6 352 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 OLFM4Q6UX06 510 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 HOOK1Q9UJC3 728 aaKnown RBP14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 AATKQ6ZMQ8 1374 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 NEMFO60524 1076 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 TRMT1Q9NXH9 659 aaKnown RBP14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
DNMT3A-202ENST00000321117 DTNBO60941 627 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 LUZP1Q86V48 1076 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 CREBRFQ8IUR6 639 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 RGS12O14924 1447 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 KIF2AO00139 706 aaPredicted RBP14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 CCP110O43303 1012 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 DHX8Q14562 1220 aaKnown RBP14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 TSC1Q92574 1164 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 HMG20BQ9P0W2 317 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 PAXBP1Q9Y5B6 917 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 ESCO1Q5FWF5 840 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 DNAJC25Q9H1X3 360 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 GPS2Q13227 327 aa14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 PA2G4Q9UQ80 394 aaKnown RBP14.97□□□□□ -0.01
DNMT3A-202ENST00000321117 MED14O60244 1454 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 ZDHHC9Q9Y397 364 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 TULP4Q9NRJ4 1543 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 STX1AQ16623 288 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 PDILTQ8N807 584 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 NEK1Q96PY6 1258 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 ATP7BP35670 1465 aa14.96□□□□□ -0.01
DNMT3A-202ENST00000321117 SERPINC1P01008 464 aa14.96□□□□□ -0.02
DNMT3A-202ENST00000321117 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.02
DNMT3A-202ENST00000321117 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.02
DNMT3A-202ENST00000321117 SFPQP23246 707 aaKnown RBP eCLIP14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 CEP135Q66GS9 1140 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 GUCY1B3Q02153 619 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 NMIQ13287 307 aaPredicted RBP14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 UNC5CLQ8IV45 518 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 USP44Q9H0E7 712 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 CCDC171Q6TFL3 1326 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 FAM173BQ6P4H8 233 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 FSIP1Q8NA03 581 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 GOLGA6L1Q8N7Z2 621 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 ZSCAN16Q9H4T2 348 aaPredicted RBP14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 STAP2Q9UGK3 403 aa14.95□□□□□ -0.02
DNMT3A-202ENST00000321117 MLH3Q9UHC1 1453 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 TPM1P09493 284 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 MAP3K5Q99683 1374 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 ALDH1L1O75891 902 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
DNMT3A-202ENST00000321117 JMYQ8N9B5 988 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms