RNA–Protein interactions for RNA: ENST00000320238.3

NHLH2-201, Transcript of nescient helix-loop-helix 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH2, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH2-201ENST00000320238 HSP90AB4PQ58FF6 505 aa23.26■■□□□ 1.31
NHLH2-201ENST00000320238 ZNF445P59923 1031 aa23.25■■□□□ 1.31
NHLH2-201ENST00000320238 RIC3Q7Z5B4 369 aa23.25■■□□□ 1.31
NHLH2-201ENST00000320238 TLR7Q9NYK1 1049 aaKnown RBP23.25■■□□□ 1.31
NHLH2-201ENST00000320238 GLRX3O76003 335 aaKnown RBP23.25■■□□□ 1.31
NHLH2-201ENST00000320238 AK2P54819 239 aa23.25■■□□□ 1.31
NHLH2-201ENST00000320238 GRM8O00222 908 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 PDIA6Q15084 440 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 USP54Q70EL1 1684 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
NHLH2-201ENST00000320238 CHRNA2Q15822 529 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
NHLH2-201ENST00000320238 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
NHLH2-201ENST00000320238 ERBB3P21860 1342 aa23.24■■□□□ 1.31
NHLH2-201ENST00000320238 ADCK5Q3MIX3 580 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 RNF214Q8ND24 703 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 NAP1L5Q96NT1 182 aaPredicted RBP23.23■■□□□ 1.31
NHLH2-201ENST00000320238 GADD45BO75293 160 aaPredicted RBP23.23■■□□□ 1.31
NHLH2-201ENST00000320238 CSB-PGBD3P0DP91 1061 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 INTS4Q96HW7 963 aaKnown RBP23.23■■□□□ 1.31
NHLH2-201ENST00000320238 CHMP4AQ9BY43 222 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 HYPKQ9NX55 129 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
NHLH2-201ENST00000320238 CACNA1FO60840 1977 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 SASH1O94885 1247 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 IGKV5-2P06315 115 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 ANP32BQ92688 251 aaKnown RBP23.22■■□□□ 1.31
NHLH2-201ENST00000320238 EAF2Q96CJ1 260 aaPredicted RBP23.22■■□□□ 1.31
NHLH2-201ENST00000320238 MTX1Q13505 466 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 RUFY3Q7L099 469 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 LINS1Q8NG48 757 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 FAM227BQ96M60 508 aa23.22■■□□□ 1.31
NHLH2-201ENST00000320238 LARGE1O95461 756 aa23.21■■□□□ 1.31
NHLH2-201ENST00000320238 COL9A3Q14050 684 aaPredicted RBP23.21■■□□□ 1.31
NHLH2-201ENST00000320238 DDX21Q9NR30 783 aaKnown RBP eCLIP23.21■■□□□ 1.31
NHLH2-201ENST00000320238 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
NHLH2-201ENST00000320238 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
NHLH2-201ENST00000320238 COPS6Q7L5N1 327 aa23.2■■□□□ 1.3
NHLH2-201ENST00000320238 BOLA2Q9H3K6 86 aa23.2■■□□□ 1.3
NHLH2-201ENST00000320238 TTC41PQ6P2S7 1318 aa23.2■■□□□ 1.3
NHLH2-201ENST00000320238 CCDC173Q0VFZ6 552 aa23.2■■□□□ 1.3
NHLH2-201ENST00000320238 G3BP1Q13283 466 aaKnown RBP eCLIP23.2■■□□□ 1.3
NHLH2-201ENST00000320238 ZNF496Q96IT1 587 aaPredicted RBP23.2■■□□□ 1.3
NHLH2-201ENST00000320238 MYD88Q99836 296 aa23.2■■□□□ 1.3
NHLH2-201ENST00000320238 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
NHLH2-201ENST00000320238 JAKMIP1Q96N16 626 aaKnown RBP23.19■■□□□ 1.3
NHLH2-201ENST00000320238 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
NHLH2-201ENST00000320238 DDX58O95786 925 aaKnown RBP23.19■■□□□ 1.3
NHLH2-201ENST00000320238 TTC14Q96N46 770 aa23.19■■□□□ 1.3
NHLH2-201ENST00000320238 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
NHLH2-201ENST00000320238 EDC3Q96F86 508 aaKnown RBP23.18■■□□□ 1.3
NHLH2-201ENST00000320238 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
NHLH2-201ENST00000320238 NDUFB9Q9Y6M9 179 aa23.18■■□□□ 1.3
NHLH2-201ENST00000320238 SLC52A2Q9HAB3 445 aa23.17■■□□□ 1.3
NHLH2-201ENST00000320238 KCNJ4P48050 445 aa23.17■■□□□ 1.3
NHLH2-201ENST00000320238 CCDC83Q8IWF9 413 aa23.17■■□□□ 1.3
NHLH2-201ENST00000320238 GPATCH3Q96I76 525 aa23.17■■□□□ 1.3
NHLH2-201ENST00000320238 TCEANC2Q96MN5 208 aa23.17■■□□□ 1.3
NHLH2-201ENST00000320238 CCDC9Q9Y3X0 531 aaKnown RBP23.17■■□□□ 1.3
NHLH2-201ENST00000320238 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
NHLH2-201ENST00000320238 LIMCH1Q9UPQ0 1083 aa23.16■■□□□ 1.3
NHLH2-201ENST00000320238 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
NHLH2-201ENST00000320238 IL17RAQ96F46 866 aa23.16■■□□□ 1.3
NHLH2-201ENST00000320238 PPP1R9BQ96SB3 815 aa23.16■■□□□ 1.3
NHLH2-201ENST00000320238 CNPY2Q9Y2B0 182 aa23.16■■□□□ 1.3
NHLH2-201ENST00000320238 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 RPAP1Q9BWH6 1393 aaPredicted RBP23.15■■□□□ 1.3
NHLH2-201ENST00000320238 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
NHLH2-201ENST00000320238 PHKG2P15735 406 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 C19orf44Q9H6X5 657 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 NMIQ13287 307 aaPredicted RBP23.15■■□□□ 1.3
NHLH2-201ENST00000320238 LRSAM1Q6UWE0 723 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 ERC1Q8IUD2 1116 aa23.15■■□□□ 1.3
NHLH2-201ENST00000320238 WDR33Q9C0J8 1336 aaKnown RBP23.14■■□□□ 1.3
NHLH2-201ENST00000320238 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.3
NHLH2-201ENST00000320238 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.3
NHLH2-201ENST00000320238 NECAB1Q8N987 351 aa23.14■■□□□ 1.3
NHLH2-201ENST00000320238 RUFY2Q8WXA3 655 aa23.14■■□□□ 1.3
NHLH2-201ENST00000320238 NCAPD2Q15021 1401 aa23.14■■□□□ 1.3
NHLH2-201ENST00000320238 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.3
NHLH2-201ENST00000320238 CHGBP05060 677 aa23.14■■□□□ 1.29
NHLH2-201ENST00000320238 SYT1P21579 422 aa23.14■■□□□ 1.29
NHLH2-201ENST00000320238 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.29
NHLH2-201ENST00000320238 EVI5LQ96CN4 794 aa23.14■■□□□ 1.29
NHLH2-201ENST00000320238 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.29
NHLH2-201ENST00000320238 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 KDM6AO15550 1401 aaPredicted RBP23.13■■□□□ 1.29
NHLH2-201ENST00000320238 A0A0D9SFI3 127 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 GCKRQ14397 625 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 SMC3Q9UQE7 1217 aa23.13■■□□□ 1.29
NHLH2-201ENST00000320238 SLIT3O75094 1523 aa23.12■■□□□ 1.29
NHLH2-201ENST00000320238 MBD3O95983 291 aa23.12■■□□□ 1.29
NHLH2-201ENST00000320238 LARP1Q6PKG0 1096 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms