RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 TNRQ92752 1358 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
SPAST-201ENST00000315285 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
SPAST-201ENST00000315285 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
SPAST-201ENST00000315285 KIF18AQ8NI77 898 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
SPAST-201ENST00000315285 ZFYVE27Q5T4F4 411 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 PANK2Q9BZ23 570 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 CCDC181Q5TID7 509 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 ADGRL2O95490 1459 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 ZNF165P49910 485 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 HSP90AB3PQ58FF7 597 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 PRM3Q9NNZ6 103 aa16.05■□□□□ 0.16
SPAST-201ENST00000315285 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
SPAST-201ENST00000315285 SLC12A7Q9Y666 1083 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 EIF3JO75822 258 aaKnown RBP16.04■□□□□ 0.16
SPAST-201ENST00000315285 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
SPAST-201ENST00000315285 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
SPAST-201ENST00000315285 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 H0YHG0 523 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 ZSCAN12O43309 604 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPAST-201ENST00000315285 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 SNRKQ9NRH2 765 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 UHRF1BP1LA0JNW5 1464 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 KDM2BQ8NHM5 1336 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 STX1AQ16623 288 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 GOLGA8AA7E2F4 631 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 TNNT1P13805 278 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
SPAST-201ENST00000315285 C16orf45Q96MC5 204 aaPredicted RBP16.03■□□□□ 0.16
SPAST-201ENST00000315285 NPATQ14207 1427 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 IFIT3O14879 490 aaKnown RBP16.02■□□□□ 0.16
SPAST-201ENST00000315285 NEMFO60524 1076 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 ALDH1L1O75891 902 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 SLC5A1P13866 664 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
SPAST-201ENST00000315285 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.15
SPAST-201ENST00000315285 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.15
SPAST-201ENST00000315285 SYCP1Q15431 976 aa16.02■□□□□ 0.15
SPAST-201ENST00000315285 BRF1Q92994 677 aa16.02■□□□□ 0.15
SPAST-201ENST00000315285 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.15
SPAST-201ENST00000315285 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.15
SPAST-201ENST00000315285 CAVIN2O95810 425 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 DDX46Q7L014 1031 aaKnown RBP16.01■□□□□ 0.15
SPAST-201ENST00000315285 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 CLCN1P35523 988 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 HAND2P61296 217 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
SPAST-201ENST00000315285 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 GPTP24298 496 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 RNF41Q9H4P4 317 aaPredicted RBP16.01■□□□□ 0.15
SPAST-201ENST00000315285 ABCC1P33527 1531 aa16.01■□□□□ 0.15
SPAST-201ENST00000315285 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
SPAST-201ENST00000315285 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
SPAST-201ENST00000315285 BIN1O00499 593 aa16■□□□□ 0.15
SPAST-201ENST00000315285 IQCA1Q86XH1 822 aa16■□□□□ 0.15
SPAST-201ENST00000315285 GRM8O00222 908 aa16■□□□□ 0.15
SPAST-201ENST00000315285 ZBTB7BO15156 539 aaPredicted RBP16■□□□□ 0.15
SPAST-201ENST00000315285 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
SPAST-201ENST00000315285 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
SPAST-201ENST00000315285 FLT4P35916 1363 aa16■□□□□ 0.15
SPAST-201ENST00000315285 DISP1Q96F81 1524 aa16■□□□□ 0.15
SPAST-201ENST00000315285 RANBP6O60518 1105 aaKnown RBP16■□□□□ 0.15
SPAST-201ENST00000315285 PPFIA3O75145 1194 aa16■□□□□ 0.15
SPAST-201ENST00000315285 GSDMDP57764 484 aa16■□□□□ 0.15
SPAST-201ENST00000315285 KSR2Q6VAB6 950 aa16■□□□□ 0.15
SPAST-201ENST00000315285 KIAA1328Q86T90 577 aa16■□□□□ 0.15
SPAST-201ENST00000315285 PHAXQ9H814 394 aaKnown RBP16■□□□□ 0.15
SPAST-201ENST00000315285 URI1O94763 535 aaPredicted RBP15.99■□□□□ 0.15
SPAST-201ENST00000315285 IQCEQ6IPM2 695 aa15.99■□□□□ 0.15
SPAST-201ENST00000315285 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
SPAST-201ENST00000315285 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms