RNA–Protein interactions for RNA: ENST00000310833.11

CD34-201, Transcript of CD34 molecule, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CD34, Length 8,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-201ENST00000310833 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 PTPRGP23470 1445 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
CD34-201ENST00000310833 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
CD34-201ENST00000310833 TDRD12Q587J7 1177 aaKnown RBP12.83□□□□□ -0.36
CD34-201ENST00000310833 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 VCX3BQ9H321 246 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
CD34-201ENST00000310833 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
CD34-201ENST00000310833 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 CACNA2D3Q8IZS8 1091 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 LRP2BPQ9P2M1 347 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 HMOX1P09601 288 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 SETDB1Q15047 1291 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 GAS8O95995 478 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 KRT83P78385 493 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 MXRA7P84157 204 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 CCDC94Q9BW85 323 aaPredicted RBP12.82□□□□□ -0.36
CD34-201ENST00000310833 VCXQ9H320 206 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 ATP11AP98196 1134 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 HAUS2Q9NVX0 235 aa12.82□□□□□ -0.36
CD34-201ENST00000310833 MTHFSP49914 203 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 STK3Q13188 491 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
CD34-201ENST00000310833 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
CD34-201ENST00000310833 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
CD34-201ENST00000310833 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
CD34-201ENST00000310833 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 CBX1P83916 185 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 PPFIBP2Q8ND30 876 aa12.81□□□□□ -0.36
CD34-201ENST00000310833 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 CABP4P57796 275 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 IRX4P78413 519 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 GOLGA1Q92805 767 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 STARD3NLO95772 234 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 GBP1P32455 592 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 ARHGAP24Q8N264 748 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 STX6O43752 255 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 STMN1P16949 149 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 SNX16P57768 344 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 NAPBQ9H115 298 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 GTF2F1P35269 517 aaKnown RBP eCLIP12.8□□□□□ -0.36
CD34-201ENST00000310833 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
CD34-201ENST00000310833 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 MIPOL1Q8TD10 442 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 SAMD15Q9P1V8 674 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 CIB2O75838 187 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 STMN2Q93045 179 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 PPP1R2P41236 205 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 USP5P45974 858 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 LMNTD2Q8IXW0 634 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 RAB3IPQ96QF0 476 aaPredicted RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 MTRF1LQ9UGC7 380 aaKnown RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 PTPRCP08575 1304 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 KRT86O43790 486 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
CD34-201ENST00000310833 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
CD34-201ENST00000310833 TRPC3Q13507 836 aa12.78□□□□□ -0.36
CD34-201ENST00000310833 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
CD34-201ENST00000310833 FCHSD2O94868 740 aa12.78□□□□□ -0.36
CD34-201ENST00000310833 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms