RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 HYPKQ9NX55 129 aa14.16□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 N4BP2Q86UW6 1770 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 RGL2O15211 777 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 NPHP1O15259 732 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 EXOSC9Q06265 439 aaKnown RBP14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 PDIA6Q15084 440 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 PROSER3Q2NL68 480 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 FHDC1Q9C0D6 1143 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 BCL2L12Q9HB09 334 aa14.15□□□□□ -0.14
CSPG4P1Y-201ENST00000306641 ERVV-1B6SEH8 477 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 NFIXQ14938 502 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 TBC1D9BQ66K14 1250 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 XAGE3Q8WTP9 111 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 SETDB2Q96T68 719 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 ZBTB3Q9H5J0 574 aa14.14□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 POLRMTO00411 1230 aaKnown RBP14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 DDR1Q08345 913 aa14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 COPS6Q7L5N1 327 aa14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 ATP10DQ9P241 1426 aa14.13□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 DLEC1Q9Y238 1755 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 TM4SF1P30408 202 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 LRP10Q7Z4F1 713 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 SYT17Q9BSW7 474 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 CACNA1SQ13698 1873 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 ANKRD31Q8N7Z5 1873 aa14.12□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 DDX58O95786 925 aaKnown RBP14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 SERPINB2P05120 415 aa14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 BRCA1P38398 1863 aaKnown RBP14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 HLFQ16534 295 aa14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 GIGYF2Q6Y7W6 1299 aaKnown RBP14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 ZBED9Q6R2W3 1325 aa14.11□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 TCERG1O14776 1098 aaKnown RBP14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 VAMP4O75379 141 aa14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 ST5P78524 1137 aa14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 RIC3Q7Z5B4 369 aa14.09□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 PLBD2Q8NHP8 589 aa14.09□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 PHAXQ9H814 394 aaKnown RBP14.09□□□□□ -0.15
CSPG4P1Y-201ENST00000306641 COL11A2P13942 1736 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 FAM177BA6PVY3 158 aa14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 GPTP24298 496 aa14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 LAMB2P55268 1798 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 TGFB2P61812 414 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PARP10Q53GL7 1025 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PPP1R42Q7Z4L9 355 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 IBTKQ9P2D0 1353 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 FLIIQ13045 1269 aa14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PRR5LQ6MZQ0 368 aa14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 TPTE2Q6XPS3 522 aa14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 ZNF428Q96B54 188 aa14.06□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 TNRC6CQ9HCJ0 1690 aaKnown RBP14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 TCIRG1Q13488 830 aa14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 ZNF34Q8IZ26 560 aa14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 TRMT2AQ8IZ69 625 aaKnown RBP14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 UBN2Q6ZU65 1347 aa14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 MYH3P11055 1940 aa14.05□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 DDX60Q8IY21 1712 aaKnown RBP14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 CHD4Q14839 1912 aa14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PDE6BP35913 854 aa14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 NEXNQ0ZGT2 675 aa14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 GPR162Q16538 588 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 KSR2Q6VAB6 950 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 G2E3Q7L622 706 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 CCDC24Q8N4L8 307 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 MYD88Q99836 296 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 BRIP1Q9BX63 1249 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
CSPG4P1Y-201ENST00000306641 ADCY9O60503 1353 aa14.02□□□□□ -0.17
CSPG4P1Y-201ENST00000306641 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
CSPG4P1Y-201ENST00000306641 H0YIN7 160 aa14.02□□□□□ -0.17
CSPG4P1Y-201ENST00000306641 NTSR2O95665 410 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms