RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 PRKRIP1Q9H875 184 aaPredicted RBP20.52■□□□□ 0.87
FANCA-201ENST00000305699 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
FANCA-201ENST00000305699 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
FANCA-201ENST00000305699 PDZRN3Q9UPQ7 1066 aa20.51■□□□□ 0.87
FANCA-201ENST00000305699 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
FANCA-201ENST00000305699 NIP7Q9Y221 180 aaKnown RBP eCLIP20.49■□□□□ 0.87
FANCA-201ENST00000305699 COL11A2P13942 1736 aaPredicted RBP20.48■□□□□ 0.87
FANCA-201ENST00000305699 MYL6BP14649 208 aa20.48■□□□□ 0.87
FANCA-201ENST00000305699 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
FANCA-201ENST00000305699 ADAMTS8Q9UP79 889 aa20.48■□□□□ 0.87
FANCA-201ENST00000305699 FAM177BA6PVY3 158 aa20.47■□□□□ 0.87
FANCA-201ENST00000305699 RASSF7Q02833 373 aa20.47■□□□□ 0.87
FANCA-201ENST00000305699 RGL2O15211 777 aa20.46■□□□□ 0.87
FANCA-201ENST00000305699 HLFQ16534 295 aa20.46■□□□□ 0.87
FANCA-201ENST00000305699 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
FANCA-201ENST00000305699 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
FANCA-201ENST00000305699 SBF1O95248 1867 aa20.46■□□□□ 0.87
FANCA-201ENST00000305699 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
FANCA-201ENST00000305699 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
FANCA-201ENST00000305699 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
FANCA-201ENST00000305699 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
FANCA-201ENST00000305699 KIF3CO14782 793 aa20.44■□□□□ 0.86
FANCA-201ENST00000305699 C21orf2O43822 256 aa20.44■□□□□ 0.86
FANCA-201ENST00000305699 GTF2E1P29083 439 aaPredicted RBP20.44■□□□□ 0.86
FANCA-201ENST00000305699 TTLL7Q6ZT98 887 aa20.44■□□□□ 0.86
FANCA-201ENST00000305699 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
FANCA-201ENST00000305699 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 MAP3K15Q6ZN16 1313 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 ERVV-1B6SEH8 477 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 SRGNP10124 158 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 LMNB1P20700 586 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 STYK1Q6J9G0 422 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
FANCA-201ENST00000305699 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
FANCA-201ENST00000305699 MASTLQ96GX5 879 aa20.42■□□□□ 0.86
FANCA-201ENST00000305699 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
FANCA-201ENST00000305699 NUP98P52948 1817 aa20.42■□□□□ 0.86
FANCA-201ENST00000305699 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
FANCA-201ENST00000305699 NFKBIEO00221 500 aa20.4■□□□□ 0.86
FANCA-201ENST00000305699 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
FANCA-201ENST00000305699 NECTIN2Q92692 538 aa20.4■□□□□ 0.86
FANCA-201ENST00000305699 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.86
FANCA-201ENST00000305699 CHL1O00533 1208 aa20.39■□□□□ 0.85
FANCA-201ENST00000305699 GPTP24298 496 aa20.39■□□□□ 0.85
FANCA-201ENST00000305699 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
FANCA-201ENST00000305699 SLX4Q8IY92 1834 aa20.39■□□□□ 0.85
FANCA-201ENST00000305699 ANXA1P04083 346 aa20.38■□□□□ 0.85
FANCA-201ENST00000305699 NPR1P16066 1061 aa20.38■□□□□ 0.85
FANCA-201ENST00000305699 PRELPP51888 382 aa20.37■□□□□ 0.85
FANCA-201ENST00000305699 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
FANCA-201ENST00000305699 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
FANCA-201ENST00000305699 ZC3H4Q9UPT8 1303 aaKnown RBP20.37■□□□□ 0.85
FANCA-201ENST00000305699 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
FANCA-201ENST00000305699 CEP350Q5VT06 3117 aa20.37■□□□□ 0.85
FANCA-201ENST00000305699 PDIA6Q15084 440 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 SOGA3Q5TF21 947 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 TOMM70O94826 608 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 GIGYF2Q6Y7W6 1299 aaKnown RBP20.36■□□□□ 0.85
FANCA-201ENST00000305699 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
FANCA-201ENST00000305699 KLRG2A4D1S0 409 aaPredicted RBP20.35■□□□□ 0.85
FANCA-201ENST00000305699 APAF1O14727 1248 aa20.35■□□□□ 0.85
FANCA-201ENST00000305699 HSPA6P17066 643 aa20.35■□□□□ 0.85
FANCA-201ENST00000305699 AIMP1Q12904 312 aaKnown RBP20.35■□□□□ 0.85
FANCA-201ENST00000305699 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
FANCA-201ENST00000305699 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
FANCA-201ENST00000305699 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
FANCA-201ENST00000305699 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
FANCA-201ENST00000305699 SUSD4Q5VX71 490 aa20.34■□□□□ 0.85
FANCA-201ENST00000305699 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
FANCA-201ENST00000305699 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
FANCA-201ENST00000305699 TNRC6CQ9HCJ0 1690 aaKnown RBP20.34■□□□□ 0.85
FANCA-201ENST00000305699 COPS6Q7L5N1 327 aa20.33■□□□□ 0.84
FANCA-201ENST00000305699 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.84
FANCA-201ENST00000305699 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 HDGFL1Q5TGJ6 251 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
FANCA-201ENST00000305699 LTBP3Q9NS15 1303 aa20.32■□□□□ 0.84
FANCA-201ENST00000305699 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
FANCA-201ENST00000305699 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
FANCA-201ENST00000305699 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
FANCA-201ENST00000305699 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
FANCA-201ENST00000305699 DICER1Q9UPY3 1922 aaKnown RBP20.3■□□□□ 0.84
FANCA-201ENST00000305699 NTSR2O95665 410 aa20.3■□□□□ 0.84
FANCA-201ENST00000305699 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
FANCA-201ENST00000305699 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
FANCA-201ENST00000305699 MBIPQ9NS73 344 aa20.3■□□□□ 0.84
FANCA-201ENST00000305699 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
FANCA-201ENST00000305699 HOXB7P09629 217 aa20.29■□□□□ 0.84
FANCA-201ENST00000305699 HSP90AB3PQ58FF7 597 aa20.29■□□□□ 0.84
FANCA-201ENST00000305699 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
FANCA-201ENST00000305699 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
FANCA-201ENST00000305699 C7orf43Q8WVR3 580 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms