RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 CCDC8Q9H0W5 538 aaPredicted RBP13.65□□□□□ -0.22
RPAP1-201ENST00000304330 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
RPAP1-201ENST00000304330 SFPQP23246 707 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPAP1-201ENST00000304330 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
RPAP1-201ENST00000304330 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
RPAP1-201ENST00000304330 CHL1O00533 1208 aa13.65□□□□□ -0.22
RPAP1-201ENST00000304330 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
RPAP1-201ENST00000304330 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
RPAP1-201ENST00000304330 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
RPAP1-201ENST00000304330 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 STX1AQ16623 288 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 A0A087WZG4 1122 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 TTF1Q15361 905 aaPredicted RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 DDX11Q96FC9 970 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 BRPF1P55201 1214 aaPredicted RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
RPAP1-201ENST00000304330 METTL24Q5JXM2 366 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 TDO2P48775 406 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
RPAP1-201ENST00000304330 USHBP1Q8N6Y0 703 aa13.63□□□□□ -0.23
RPAP1-201ENST00000304330 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
RPAP1-201ENST00000304330 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
RPAP1-201ENST00000304330 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
RPAP1-201ENST00000304330 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
RPAP1-201ENST00000304330 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
RPAP1-201ENST00000304330 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
RPAP1-201ENST00000304330 ADCY5O95622 1261 aa13.63□□□□□ -0.23
RPAP1-201ENST00000304330 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
RPAP1-201ENST00000304330 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 GRM8O00222 908 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 EIF3JO75822 258 aaKnown RBP13.62□□□□□ -0.23
RPAP1-201ENST00000304330 CHMLP26374 656 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
RPAP1-201ENST00000304330 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 ZNF213O14771 459 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 F13A1P00488 732 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 ABCC4O15439 1325 aa13.62□□□□□ -0.23
RPAP1-201ENST00000304330 TUBB4AP04350 444 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 MAP3K12Q12852 859 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 CAGE1Q8TC20 777 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 OFD1O75665 1012 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
RPAP1-201ENST00000304330 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 MYO6Q9UM54 1294 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 MSH6P52701 1360 aa13.61□□□□□ -0.23
RPAP1-201ENST00000304330 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
RPAP1-201ENST00000304330 ZNF165P49910 485 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 RBM8AQ9Y5S9 174 aaKnown RBP13.6□□□□□ -0.23
RPAP1-201ENST00000304330 ATL3Q6DD88 541 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 IQCEQ6IPM2 695 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 GBP3Q9H0R5 595 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
RPAP1-201ENST00000304330 CAMK4Q16566 473 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 UBXN4Q92575 508 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
RPAP1-201ENST00000304330 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 EPS15P42566 896 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
RPAP1-201ENST00000304330 NPHP3Q7Z494 1330 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 FOXO3O43524 673 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 FBLN1P23142 703 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 NAPBQ9H115 298 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 C16orf71Q8IYS4 520 aaPredicted RBP13.59□□□□□ -0.23
RPAP1-201ENST00000304330 EYA1Q99502 592 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 ANKRD18BA2A2Z9 1011 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 ZNF445P59923 1031 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 ZNF287Q9HBT7 754 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 TCEAL9Q9UHQ7 104 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 MLH3Q9UHC1 1453 aa13.59□□□□□ -0.23
RPAP1-201ENST00000304330 UNC13BO14795 1591 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 SLC5A1P13866 664 aa13.58□□□□□ -0.23
RPAP1-201ENST00000304330 TAF3Q5VWG9 929 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms