RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 ST5P78524 1137 aa14.27□□□□□ -0.13
HMGN1P35-201ENST00000303758 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
HMGN1P35-201ENST00000303758 CNBD1Q8NA66 436 aa14.27□□□□□ -0.13
HMGN1P35-201ENST00000303758 RUNDC1Q96C34 613 aa14.27□□□□□ -0.13
HMGN1P35-201ENST00000303758 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.13
HMGN1P35-201ENST00000303758 EIF4A1P60842 406 aaKnown RBP14.26□□□□□ -0.13
HMGN1P35-201ENST00000303758 NUP98P52948 1817 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 NBPF26B4DH59 902 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 PDE6BP35913 854 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 C1QTNF8P60827 252 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 PRR5LQ6MZQ0 368 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 NBPF10Q6P3W6 841 aaKnown RBP14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 CLEC4GQ6UXB4 293 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 NBPF15Q8N660 670 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
HMGN1P35-201ENST00000303758 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 MYL6BP14649 208 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 NBPF5PQ86XG9 351 aaPredicted RBP14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 CCDC24Q8N4L8 307 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 ZNF622Q969S3 477 aaKnown RBP eCLIP14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 SBF1O95248 1867 aa14.24□□□□□ -0.13
HMGN1P35-201ENST00000303758 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 LAS1LQ9Y4W2 734 aaKnown RBP14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 TIAM2Q8IVF5 1701 aa14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
HMGN1P35-201ENST00000303758 C9orf131Q5VYM1 1079 aa14.22□□□□□ -0.13
HMGN1P35-201ENST00000303758 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 SENP3-EIF4A1A0A087X0R7 540 aa14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 RGL2O15211 777 aa14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 GTF2E1P29083 439 aaPredicted RBP14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
HMGN1P35-201ENST00000303758 MAP3K15Q6ZN16 1313 aa14.2□□□□□ -0.14
HMGN1P35-201ENST00000303758 ANKRD36CQ5JPF3 1778 aa14.2□□□□□ -0.14
HMGN1P35-201ENST00000303758 RASSF7Q02833 373 aa14.2□□□□□ -0.14
HMGN1P35-201ENST00000303758 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
HMGN1P35-201ENST00000303758 HLFQ16534 295 aa14.19□□□□□ -0.14
HMGN1P35-201ENST00000303758 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
HMGN1P35-201ENST00000303758 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
HMGN1P35-201ENST00000303758 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
HMGN1P35-201ENST00000303758 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
HMGN1P35-201ENST00000303758 FER1L6Q2WGJ9 1857 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 TTLL7Q6ZT98 887 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 MASTLQ96GX5 879 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
HMGN1P35-201ENST00000303758 C21orf2O43822 256 aa14.17□□□□□ -0.14
HMGN1P35-201ENST00000303758 STYK1Q6J9G0 422 aa14.17□□□□□ -0.14
HMGN1P35-201ENST00000303758 NECTIN2Q92692 538 aa14.17□□□□□ -0.14
HMGN1P35-201ENST00000303758 KDM2BQ8NHM5 1336 aa14.16□□□□□ -0.14
HMGN1P35-201ENST00000303758 DICER1Q9UPY3 1922 aaKnown RBP14.16□□□□□ -0.14
HMGN1P35-201ENST00000303758 SRGNP10124 158 aa14.16□□□□□ -0.14
HMGN1P35-201ENST00000303758 LMNB1P20700 586 aa14.16□□□□□ -0.14
HMGN1P35-201ENST00000303758 GPTP24298 496 aa14.16□□□□□ -0.14
HMGN1P35-201ENST00000303758 CHL1O00533 1208 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 APAF1O14727 1248 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 ANP32CO43423 234 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 ANXA1P04083 346 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 NPR1P16066 1061 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 CALD1Q05682 793 aaKnown RBP14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 SOGA3Q5TF21 947 aa14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
HMGN1P35-201ENST00000303758 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.15
HMGN1P35-201ENST00000303758 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
HMGN1P35-201ENST00000303758 KIF3CO14782 793 aa14.14□□□□□ -0.15
HMGN1P35-201ENST00000303758 HDGFL1Q5TGJ6 251 aa14.14□□□□□ -0.15
HMGN1P35-201ENST00000303758 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
HMGN1P35-201ENST00000303758 C16orf71Q8IYS4 520 aaPredicted RBP14.14□□□□□ -0.15
HMGN1P35-201ENST00000303758 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 NFKBIEO00221 500 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 AIMP1Q12904 312 aaKnown RBP14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 PROSER3Q2NL68 480 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 TAOK3Q9H2K8 898 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 UBN2Q6ZU65 1347 aa14.13□□□□□ -0.15
HMGN1P35-201ENST00000303758 HOXB7P09629 217 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 GNAI1P63096 354 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 PDIA6Q15084 440 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 ERFEQ4G0M1 354 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 PARP10Q53GL7 1025 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 HSP90AB3PQ58FF7 597 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 XAGE3Q8WTP9 111 aa14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 DDX21Q9NR30 783 aaKnown RBP eCLIP14.12□□□□□ -0.15
HMGN1P35-201ENST00000303758 ALDH1B1P30837 517 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 RIC1Q4ADV7 1423 aa14.11□□□□□ -0.15
HMGN1P35-201ENST00000303758 CCDC93Q567U6 631 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms