RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 NIP7Q9Y221 180 aaKnown RBP eCLIP23.96■■□□□ 1.43
TMEM88-201ENST00000301599 NEUROD2Q15784 382 aa23.95■■□□□ 1.42
TMEM88-201ENST00000301599 CCDC146Q8IYE0 955 aa23.95■■□□□ 1.42
TMEM88-201ENST00000301599 NGEFQ8N5V2 710 aa23.95■■□□□ 1.42
TMEM88-201ENST00000301599 SCN7AQ01118 1682 aa23.95■■□□□ 1.42
TMEM88-201ENST00000301599 KIF3CO14782 793 aa23.94■■□□□ 1.42
TMEM88-201ENST00000301599 ADAMTS8Q9UP79 889 aa23.94■■□□□ 1.42
TMEM88-201ENST00000301599 ERVV-1B6SEH8 477 aa23.93■■□□□ 1.42
TMEM88-201ENST00000301599 HLFQ16534 295 aa23.93■■□□□ 1.42
TMEM88-201ENST00000301599 CNKSR1Q969H4 720 aa23.93■■□□□ 1.42
TMEM88-201ENST00000301599 SRGNP10124 158 aa23.92■■□□□ 1.42
TMEM88-201ENST00000301599 LMNB1P20700 586 aa23.92■■□□□ 1.42
TMEM88-201ENST00000301599 STYK1Q6J9G0 422 aa23.92■■□□□ 1.42
TMEM88-201ENST00000301599 MYL6BP14649 208 aa23.91■■□□□ 1.42
TMEM88-201ENST00000301599 KIF6Q6ZMV9 814 aa23.91■■□□□ 1.42
TMEM88-201ENST00000301599 MASTLQ96GX5 879 aa23.91■■□□□ 1.42
TMEM88-201ENST00000301599 KDM3BQ7LBC6 1761 aa23.91■■□□□ 1.42
TMEM88-201ENST00000301599 ERBB4Q15303 1308 aa23.9■■□□□ 1.42
TMEM88-201ENST00000301599 C21orf2O43822 256 aa23.9■■□□□ 1.42
TMEM88-201ENST00000301599 RASSF7Q02833 373 aa23.9■■□□□ 1.42
TMEM88-201ENST00000301599 MAP3K15Q6ZN16 1313 aa23.89■■□□□ 1.42
TMEM88-201ENST00000301599 KDM2BQ8NHM5 1336 aa23.89■■□□□ 1.42
TMEM88-201ENST00000301599 FAM177BA6PVY3 158 aa23.89■■□□□ 1.41
TMEM88-201ENST00000301599 EIF2S2P20042 333 aaKnown RBP23.89■■□□□ 1.41
TMEM88-201ENST00000301599 GTF2E1P29083 439 aaPredicted RBP23.89■■□□□ 1.41
TMEM88-201ENST00000301599 TTLL7Q6ZT98 887 aa23.89■■□□□ 1.41
TMEM88-201ENST00000301599 KLRG2A4D1S0 409 aaPredicted RBP23.88■■□□□ 1.41
TMEM88-201ENST00000301599 NMRK2Q9NPI5 230 aa23.88■■□□□ 1.41
TMEM88-201ENST00000301599 ZNF219Q9P2Y4 722 aaPredicted RBP23.88■■□□□ 1.41
TMEM88-201ENST00000301599 BCORQ6W2J9 1755 aa23.88■■□□□ 1.41
TMEM88-201ENST00000301599 CHL1O00533 1208 aa23.87■■□□□ 1.41
TMEM88-201ENST00000301599 TOMM70O94826 608 aa23.87■■□□□ 1.41
TMEM88-201ENST00000301599 NYXQ9GZU5 481 aa23.87■■□□□ 1.41
TMEM88-201ENST00000301599 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
TMEM88-201ENST00000301599 ZC3H4Q9UPT8 1303 aaKnown RBP23.86■■□□□ 1.41
TMEM88-201ENST00000301599 DLEC1Q9Y238 1755 aa23.86■■□□□ 1.41
TMEM88-201ENST00000301599 ANKRD31Q8N7Z5 1873 aa23.86■■□□□ 1.41
TMEM88-201ENST00000301599 NFKBIEO00221 500 aa23.86■■□□□ 1.41
TMEM88-201ENST00000301599 NPR1P16066 1061 aa23.86■■□□□ 1.41
TMEM88-201ENST00000301599 PRELPP51888 382 aa23.85■■□□□ 1.41
TMEM88-201ENST00000301599 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
TMEM88-201ENST00000301599 PRPF40BQ6NWY9 871 aaKnown RBP23.85■■□□□ 1.41
TMEM88-201ENST00000301599 LAS1LQ9Y4W2 734 aaKnown RBP23.85■■□□□ 1.41
TMEM88-201ENST00000301599 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
TMEM88-201ENST00000301599 HSPA6P17066 643 aa23.84■■□□□ 1.41
TMEM88-201ENST00000301599 PDIA6Q15084 440 aa23.84■■□□□ 1.41
TMEM88-201ENST00000301599 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
TMEM88-201ENST00000301599 ZBTB3Q9H5J0 574 aa23.84■■□□□ 1.41
TMEM88-201ENST00000301599 RRAGCQ9HB90 399 aa23.84■■□□□ 1.41
TMEM88-201ENST00000301599 SBF1O95248 1867 aa23.83■■□□□ 1.4
TMEM88-201ENST00000301599 ALDH1B1P30837 517 aa23.82■■□□□ 1.4
TMEM88-201ENST00000301599 GIGYF2Q6Y7W6 1299 aaKnown RBP23.82■■□□□ 1.4
TMEM88-201ENST00000301599 GLTPD2A6NH11 291 aa23.81■■□□□ 1.4
TMEM88-201ENST00000301599 GPTP24298 496 aa23.81■■□□□ 1.4
TMEM88-201ENST00000301599 ZNF34Q8IZ26 560 aa23.81■■□□□ 1.4
TMEM88-201ENST00000301599 DPY19L2Q6NUT2 758 aa23.8■■□□□ 1.4
TMEM88-201ENST00000301599 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
TMEM88-201ENST00000301599 C7orf43Q8WVR3 580 aa23.8■■□□□ 1.4
TMEM88-201ENST00000301599 TAOK3Q9H2K8 898 aa23.8■■□□□ 1.4
TMEM88-201ENST00000301599 LTBP3Q9NS15 1303 aa23.8■■□□□ 1.4
TMEM88-201ENST00000301599 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
TMEM88-201ENST00000301599 SUSD4Q5VX71 490 aa23.79■■□□□ 1.4
TMEM88-201ENST00000301599 NUTM1Q86Y26 1132 aa23.79■■□□□ 1.4
TMEM88-201ENST00000301599 RBM46Q8TBY0 533 aaKnown RBP23.79■■□□□ 1.4
TMEM88-201ENST00000301599 NECTIN2Q92692 538 aa23.79■■□□□ 1.4
TMEM88-201ENST00000301599 CFAP44Q96MT7 982 aa23.79■■□□□ 1.4
TMEM88-201ENST00000301599 APAF1O14727 1248 aa23.78■■□□□ 1.4
TMEM88-201ENST00000301599 PROSER3Q2NL68 480 aa23.78■■□□□ 1.4
TMEM88-201ENST00000301599 PARP10Q53GL7 1025 aa23.78■■□□□ 1.4
TMEM88-201ENST00000301599 PPP1R42Q7Z4L9 355 aa23.78■■□□□ 1.4
TMEM88-201ENST00000301599 ANXA1P04083 346 aa23.77■■□□□ 1.4
TMEM88-201ENST00000301599 CCDC93Q567U6 631 aa23.77■■□□□ 1.4
TMEM88-201ENST00000301599 COPS6Q7L5N1 327 aa23.77■■□□□ 1.4
TMEM88-201ENST00000301599 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
TMEM88-201ENST00000301599 COL11A2P13942 1736 aaPredicted RBP23.76■■□□□ 1.39
TMEM88-201ENST00000301599 SLX4Q8IY92 1834 aa23.76■■□□□ 1.39
TMEM88-201ENST00000301599 VEGFAP15692 232 aaPredicted RBP23.76■■□□□ 1.39
TMEM88-201ENST00000301599 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
TMEM88-201ENST00000301599 KRT24Q2M2I5 525 aa23.76■■□□□ 1.39
TMEM88-201ENST00000301599 UBN2Q6ZU65 1347 aa23.76■■□□□ 1.39
TMEM88-201ENST00000301599 HOXB7P09629 217 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 CALD1Q05682 793 aaKnown RBP23.75■■□□□ 1.39
TMEM88-201ENST00000301599 CRY2Q49AN0 593 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 HSP90AB3PQ58FF7 597 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 RTKN2Q8IZC4 609 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 XAGE3Q8WTP9 111 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 IBTKQ9P2D0 1353 aaPredicted RBP23.75■■□□□ 1.39
TMEM88-201ENST00000301599 NUP98P52948 1817 aa23.75■■□□□ 1.39
TMEM88-201ENST00000301599 FSTL1Q12841 308 aa23.74■■□□□ 1.39
TMEM88-201ENST00000301599 NTSR2O95665 410 aa23.73■■□□□ 1.39
TMEM88-201ENST00000301599 APLP1P51693 650 aa23.73■■□□□ 1.39
TMEM88-201ENST00000301599 RPGRQ92834 1020 aaKnown RBP23.73■■□□□ 1.39
TMEM88-201ENST00000301599 UTP14AQ9BVJ6 771 aaKnown RBP23.73■■□□□ 1.39
TMEM88-201ENST00000301599 ZNF853P0CG23 659 aa23.72■■□□□ 1.39
TMEM88-201ENST00000301599 HOXA10P31260 410 aaPredicted RBP23.72■■□□□ 1.39
TMEM88-201ENST00000301599 GNAI1P63096 354 aa23.72■■□□□ 1.39
TMEM88-201ENST00000301599 HDGFL1Q5TGJ6 251 aa23.72■■□□□ 1.39
TMEM88-201ENST00000301599 FER1L6Q2WGJ9 1857 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms