RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 AKAP17AQ02040 695 aaKnown RBP19.32■□□□□ 0.68
DCLK2-201ENST00000296550 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
DCLK2-201ENST00000296550 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
DCLK2-201ENST00000296550 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
DCLK2-201ENST00000296550 CNNM1Q9NRU3 951 aa19.32■□□□□ 0.68
DCLK2-201ENST00000296550 KDM4AO75164 1064 aa19.32■□□□□ 0.68
DCLK2-201ENST00000296550 TCEANC2Q96MN5 208 aa19.32■□□□□ 0.68
DCLK2-201ENST00000296550 PDIA4P13667 645 aaKnown RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 NECAB1Q8N987 351 aa19.31■□□□□ 0.68
DCLK2-201ENST00000296550 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
DCLK2-201ENST00000296550 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
DCLK2-201ENST00000296550 CDK12Q9NYV4 1490 aaPredicted RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 RNMTO43148 476 aaKnown RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 LRSAM1Q6UWE0 723 aa19.31■□□□□ 0.68
DCLK2-201ENST00000296550 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
DCLK2-201ENST00000296550 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
DCLK2-201ENST00000296550 ZSCAN22P10073 491 aaPredicted RBP19.3■□□□□ 0.68
DCLK2-201ENST00000296550 CAMK4Q16566 473 aa19.3■□□□□ 0.68
DCLK2-201ENST00000296550 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
DCLK2-201ENST00000296550 ZNF396Q96N95 335 aaPredicted RBP19.3■□□□□ 0.68
DCLK2-201ENST00000296550 USP25Q9UHP3 1055 aa19.3■□□□□ 0.68
DCLK2-201ENST00000296550 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
DCLK2-201ENST00000296550 ME1P48163 572 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 INTS4Q96HW7 963 aaKnown RBP19.29■□□□□ 0.68
DCLK2-201ENST00000296550 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 TTC41PQ6P2S7 1318 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 TPM3P06753 285 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 TMX4Q9H1E5 349 aaPredicted RBP19.29■□□□□ 0.68
DCLK2-201ENST00000296550 AK2P54819 239 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 ZBTB3Q9H5J0 574 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 TFIP11Q9UBB9 837 aaKnown RBP19.29■□□□□ 0.68
DCLK2-201ENST00000296550 ALKQ9UM73 1620 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
DCLK2-201ENST00000296550 RBM10P98175 930 aaKnown RBP19.28■□□□□ 0.68
DCLK2-201ENST00000296550 STK38Q15208 465 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 MAP3K11Q16584 847 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 NFATC2IPQ8NCF5 419 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 USP6P35125 1406 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 CFAP45Q9UL16 551 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 KIDINS220Q9ULH0 1771 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 IFIT1P09914 478 aaKnown RBP19.28■□□□□ 0.68
DCLK2-201ENST00000296550 SCAND2PQ9GZW5 306 aaPredicted RBP19.28■□□□□ 0.68
DCLK2-201ENST00000296550 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 CNPY2Q9Y2B0 182 aa19.28■□□□□ 0.68
DCLK2-201ENST00000296550 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
DCLK2-201ENST00000296550 HOXB7P09629 217 aa19.27■□□□□ 0.68
DCLK2-201ENST00000296550 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
DCLK2-201ENST00000296550 CPA1P15085 419 aa19.27■□□□□ 0.68
DCLK2-201ENST00000296550 G3V3G9 751 aa19.27■□□□□ 0.67
DCLK2-201ENST00000296550 UBE2HP62256 183 aa19.27■□□□□ 0.67
DCLK2-201ENST00000296550 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.67
DCLK2-201ENST00000296550 HSPA2P54652 639 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 CREBRFQ8IUR6 639 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 RASSF8Q8NHQ8 419 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
DCLK2-201ENST00000296550 ERICH2A1L162 156 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 KCNQ3O43525 872 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 CDK11BP21127 795 aaKnown RBP19.26■□□□□ 0.67
DCLK2-201ENST00000296550 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.67
DCLK2-201ENST00000296550 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
DCLK2-201ENST00000296550 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
DCLK2-201ENST00000296550 GOLIM4O00461 696 aa19.25■□□□□ 0.67
DCLK2-201ENST00000296550 SAFBQ15424 915 aaKnown RBP eCLIP19.25■□□□□ 0.67
DCLK2-201ENST00000296550 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
DCLK2-201ENST00000296550 NAT10Q9H0A0 1025 aaKnown RBP19.25■□□□□ 0.67
DCLK2-201ENST00000296550 MED14O60244 1454 aa19.25■□□□□ 0.67
DCLK2-201ENST00000296550 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
DCLK2-201ENST00000296550 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
DCLK2-201ENST00000296550 HCLS1P14317 486 aaPredicted RBP19.25■□□□□ 0.67
DCLK2-201ENST00000296550 SGSM2O43147 1006 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 PKP1Q13835 747 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 ADGRB1O14514 1584 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 BICC1Q9H694 974 aaKnown RBP19.24■□□□□ 0.67
DCLK2-201ENST00000296550 PTPRMP28827 1452 aa19.24■□□□□ 0.67
DCLK2-201ENST00000296550 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 STARD3NLO95772 234 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 NEK1Q96PY6 1258 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 NEXMIFQ5QGS0 1516 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 LMBR1LQ6UX01 489 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 LRRC7Q96NW7 1537 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 RRP12Q5JTH9 1297 aaKnown RBP19.23■□□□□ 0.67
DCLK2-201ENST00000296550 PALD1Q9ULE6 856 aa19.23■□□□□ 0.67
DCLK2-201ENST00000296550 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
DCLK2-201ENST00000296550 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
DCLK2-201ENST00000296550 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
DCLK2-201ENST00000296550 AOX1Q06278 1338 aa19.22■□□□□ 0.67
DCLK2-201ENST00000296550 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
DCLK2-201ENST00000296550 HMG20BQ9P0W2 317 aa19.22■□□□□ 0.67
DCLK2-201ENST00000296550 ARHGEF40Q8TER5 1519 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms