RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
PCYT1A-201ENST00000292823 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
PCYT1A-201ENST00000292823 BCORL1Q5H9F3 1711 aa11.66□□□□□ -0.54
PCYT1A-201ENST00000292823 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
PCYT1A-201ENST00000292823 INTS4Q96HW7 963 aaKnown RBP11.66□□□□□ -0.54
PCYT1A-201ENST00000292823 SEC24BO95487 1268 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 ANO10Q9NW15 660 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 SNRPA1P09661 255 aaKnown RBP11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 IMMTQ16891 758 aaKnown RBP11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 ABCA9Q8IUA7 1624 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 PDILTQ8N807 584 aa11.65□□□□□ -0.54
PCYT1A-201ENST00000292823 AOX1Q06278 1338 aa11.65□□□□□ -0.55
PCYT1A-201ENST00000292823 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.55
PCYT1A-201ENST00000292823 EIF4A2Q14240 407 aaKnown RBP11.65□□□□□ -0.55
PCYT1A-201ENST00000292823 MEIS3Q99687 375 aa11.65□□□□□ -0.55
PCYT1A-201ENST00000292823 LMTK3Q96Q04 1460 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 GJB2P29033 226 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 SERPINC1P01008 464 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 CEBPZQ03701 1054 aaKnown RBP11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 AK7Q96M32 723 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 CWC15Q9P013 229 aaKnown RBP11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 UGGT1Q9NYU2 1555 aa11.64□□□□□ -0.55
PCYT1A-201ENST00000292823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 CCDC69A6NI79 296 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 TXLNAP40222 546 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 USP26Q9BXU7 913 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 HSP90B2PQ58FF3 399 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 FAM177BA6PVY3 158 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 MYD88Q99836 296 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 PCDH11XQ9BZA7 1347 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 PCDH11YQ9BZA8 1340 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 MAP3K5Q99683 1374 aa11.63□□□□□ -0.55
PCYT1A-201ENST00000292823 TSPOAP1O95153 1857 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 EPB41L2O43491 1005 aaKnown RBP11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 NOM1Q5C9Z4 860 aaKnown RBP11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 IP6K1Q92551 441 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 SLC5A1P13866 664 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 ABCC3O15438 1527 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 IL2RBP14784 551 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 IL13P35225 146 aa11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 ZSCAN16Q9H4T2 348 aaPredicted RBP11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
PCYT1A-201ENST00000292823 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 CEP89Q96ST8 783 aa11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 RAD21O60216 631 aa11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 KIAA0232Q92628 1395 aa11.61□□□□□ -0.55
PCYT1A-201ENST00000292823 GSDMDP57764 484 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 STX1AQ16623 288 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 ADCY5O95622 1261 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 PPFIBP1Q86W92 1011 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 RAD50Q92878 1312 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 MAGEC2Q9UBF1 373 aaPredicted RBP11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 METTL24Q5JXM2 366 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 USP25Q9UHP3 1055 aa11.6□□□□□ -0.55
PCYT1A-201ENST00000292823 TXLNBQ8N3L3 684 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 ST5P78524 1137 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 RUFY1Q96T51 708 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 ABCC4O15439 1325 aa11.59□□□□□ -0.55
PCYT1A-201ENST00000292823 ATP7BP35670 1465 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms