RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 A0A087WZG4 1122 aa11.8□□□□□ -0.52
TFF1-201ENST00000291527 GLTPD2A6NH11 291 aa11.8□□□□□ -0.52
TFF1-201ENST00000291527 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
TFF1-201ENST00000291527 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
TFF1-201ENST00000291527 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
TFF1-201ENST00000291527 SRGNP10124 158 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 CFAP53Q96M91 514 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 SETDB2Q96T68 719 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
TFF1-201ENST00000291527 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
TFF1-201ENST00000291527 PRPF40BQ6NWY9 871 aaKnown RBP11.78□□□□□ -0.52
TFF1-201ENST00000291527 C16orf71Q8IYS4 520 aaPredicted RBP11.78□□□□□ -0.52
TFF1-201ENST00000291527 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.52
TFF1-201ENST00000291527 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
TFF1-201ENST00000291527 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
TFF1-201ENST00000291527 PDE6BP35913 854 aa11.77□□□□□ -0.53
TFF1-201ENST00000291527 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.53
TFF1-201ENST00000291527 CNBD1Q8NA66 436 aa11.77□□□□□ -0.53
TFF1-201ENST00000291527 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
TFF1-201ENST00000291527 FSTL1Q12841 308 aa11.76□□□□□ -0.53
TFF1-201ENST00000291527 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
TFF1-201ENST00000291527 RTF1Q92541 710 aaKnown RBP11.76□□□□□ -0.53
TFF1-201ENST00000291527 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
TFF1-201ENST00000291527 COL4A5P29400 1685 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 TAF1P21675 1872 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
TFF1-201ENST00000291527 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 STYK1Q6J9G0 422 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
TFF1-201ENST00000291527 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
TFF1-201ENST00000291527 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
TFF1-201ENST00000291527 EIF4A1P60842 406 aaKnown RBP11.74□□□□□ -0.53
TFF1-201ENST00000291527 COL13A1Q5TAT6 717 aaPredicted RBP11.74□□□□□ -0.53
TFF1-201ENST00000291527 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
TFF1-201ENST00000291527 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
TFF1-201ENST00000291527 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
TFF1-201ENST00000291527 RRP7AQ9Y3A4 280 aaKnown RBP11.74□□□□□ -0.53
TFF1-201ENST00000291527 KLRG2A4D1S0 409 aaPredicted RBP11.73□□□□□ -0.53
TFF1-201ENST00000291527 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
TFF1-201ENST00000291527 ANXA1P04083 346 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 MYL6BP14649 208 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 ST5P78524 1137 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
TFF1-201ENST00000291527 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
TFF1-201ENST00000291527 NPHP1O15259 732 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 GPTP24298 496 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 NFE2L2Q16236 605 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
TFF1-201ENST00000291527 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.53
TFF1-201ENST00000291527 PDIA6Q15084 440 aa11.71□□□□□ -0.53
TFF1-201ENST00000291527 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
TFF1-201ENST00000291527 SUSD4Q5VX71 490 aa11.71□□□□□ -0.53
TFF1-201ENST00000291527 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
TFF1-201ENST00000291527 LAMB2P55268 1798 aa11.7□□□□□ -0.54
TFF1-201ENST00000291527 LTBP1Q14766 1721 aa11.7□□□□□ -0.54
TFF1-201ENST00000291527 NPR1P16066 1061 aa11.7□□□□□ -0.54
TFF1-201ENST00000291527 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
TFF1-201ENST00000291527 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
TFF1-201ENST00000291527 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
TFF1-201ENST00000291527 TPTE2Q6XPS3 522 aa11.69□□□□□ -0.54
TFF1-201ENST00000291527 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
TFF1-201ENST00000291527 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
TFF1-201ENST00000291527 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
TFF1-201ENST00000291527 SCN4AP35499 1836 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
TFF1-201ENST00000291527 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
TFF1-201ENST00000291527 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 CCDC146Q8IYE0 955 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
TFF1-201ENST00000291527 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 COL4A1P02462 1669 aa11.68□□□□□ -0.54
TFF1-201ENST00000291527 NTSR2O95665 410 aa11.67□□□□□ -0.54
TFF1-201ENST00000291527 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
TFF1-201ENST00000291527 CRY2Q49AN0 593 aa11.67□□□□□ -0.54
TFF1-201ENST00000291527 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
TFF1-201ENST00000291527 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
TFF1-201ENST00000291527 ERVV-1B6SEH8 477 aa11.66□□□□□ -0.54
TFF1-201ENST00000291527 HSPA1AP0DMV8 641 aaKnown RBP11.66□□□□□ -0.54
TFF1-201ENST00000291527 HSPA1BP0DMV9 641 aaKnown RBP11.66□□□□□ -0.54
TFF1-201ENST00000291527 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
TFF1-201ENST00000291527 RIPK4P57078 832 aa11.66□□□□□ -0.54
TFF1-201ENST00000291527 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
TFF1-201ENST00000291527 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
TFF1-201ENST00000291527 RNF123Q5XPI4 1314 aa11.65□□□□□ -0.54
TFF1-201ENST00000291527 ANKRD36CQ5JPF3 1778 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms