RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
CCDC58-201ENST00000291458 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
CCDC58-201ENST00000291458 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
CCDC58-201ENST00000291458 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
CCDC58-201ENST00000291458 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
CCDC58-201ENST00000291458 SENP3-EIF4A1A0A087X0R7 540 aa12.88□□□□□ -0.35
CCDC58-201ENST00000291458 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
CCDC58-201ENST00000291458 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CCDC58-201ENST00000291458 DPEP1P16444 411 aa12.88□□□□□ -0.35
CCDC58-201ENST00000291458 RIPK4P57078 832 aa12.88□□□□□ -0.35
CCDC58-201ENST00000291458 NFIXQ14938 502 aa12.88□□□□□ -0.35
CCDC58-201ENST00000291458 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-201ENST00000291458 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
CCDC58-201ENST00000291458 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
CCDC58-201ENST00000291458 TEX13AQ9BXU3 409 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-201ENST00000291458 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
CCDC58-201ENST00000291458 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
CCDC58-201ENST00000291458 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
CCDC58-201ENST00000291458 CARMIL3Q8ND23 1372 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 A0A087WZG4 1122 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 PYGBP11216 843 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 CHRNA5P30532 468 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
CCDC58-201ENST00000291458 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
CCDC58-201ENST00000291458 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
CCDC58-201ENST00000291458 LAS1LQ9Y4W2 734 aaKnown RBP12.86□□□□□ -0.35
CCDC58-201ENST00000291458 NRXN2Q9P2S2 1712 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-201ENST00000291458 NPHP1O15259 732 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
CCDC58-201ENST00000291458 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-201ENST00000291458 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
CCDC58-201ENST00000291458 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-201ENST00000291458 SERPINB2P05120 415 aa12.84□□□□□ -0.35
CCDC58-201ENST00000291458 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-201ENST00000291458 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
CCDC58-201ENST00000291458 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
CCDC58-201ENST00000291458 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
CCDC58-201ENST00000291458 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.35
CCDC58-201ENST00000291458 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-201ENST00000291458 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
CCDC58-201ENST00000291458 TM4SF1P30408 202 aa12.83□□□□□ -0.36
CCDC58-201ENST00000291458 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
CCDC58-201ENST00000291458 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
CCDC58-201ENST00000291458 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
CCDC58-201ENST00000291458 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-201ENST00000291458 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
CCDC58-201ENST00000291458 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
CCDC58-201ENST00000291458 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
CCDC58-201ENST00000291458 MYL6BP14649 208 aa12.82□□□□□ -0.36
CCDC58-201ENST00000291458 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
CCDC58-201ENST00000291458 TGFB2P61812 414 aa12.82□□□□□ -0.36
CCDC58-201ENST00000291458 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
CCDC58-201ENST00000291458 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
CCDC58-201ENST00000291458 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-201ENST00000291458 ATP10DQ9P241 1426 aa12.81□□□□□ -0.36
CCDC58-201ENST00000291458 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
CCDC58-201ENST00000291458 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
CCDC58-201ENST00000291458 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
CCDC58-201ENST00000291458 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
CCDC58-201ENST00000291458 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
CCDC58-201ENST00000291458 NUP98P52948 1817 aa12.8□□□□□ -0.36
CCDC58-201ENST00000291458 MAP3K13O43283 966 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 ANP32CO43423 234 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 ANXA1P04083 346 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
CCDC58-201ENST00000291458 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
CCDC58-201ENST00000291458 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
CCDC58-201ENST00000291458 APAF1O14727 1248 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 KCNA3P22001 575 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 PRR5LQ6MZQ0 368 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
CCDC58-201ENST00000291458 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
CCDC58-201ENST00000291458 ST5P78524 1137 aa12.77□□□□□ -0.37
CCDC58-201ENST00000291458 HLFQ16534 295 aa12.77□□□□□ -0.37
CCDC58-201ENST00000291458 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
CCDC58-201ENST00000291458 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
CCDC58-201ENST00000291458 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC58-201ENST00000291458 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC58-201ENST00000291458 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
CCDC58-201ENST00000291458 GPTP24298 496 aa12.76□□□□□ -0.37
CCDC58-201ENST00000291458 RASSF7Q02833 373 aa12.76□□□□□ -0.37
CCDC58-201ENST00000291458 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
CCDC58-201ENST00000291458 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-201ENST00000291458 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
CCDC58-201ENST00000291458 H0YIN7 160 aa12.75□□□□□ -0.37
CCDC58-201ENST00000291458 ADCY9O60503 1353 aa12.75□□□□□ -0.37
CCDC58-201ENST00000291458 GABBR2O75899 941 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms