RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
HMHB1-201ENST00000289448 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMHB1-201ENST00000289448 RGL2O15211 777 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 C21orf2O43822 256 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 SRGNP10124 158 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 ST5P78524 1137 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
HMHB1-201ENST00000289448 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
HMHB1-201ENST00000289448 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
HMHB1-201ENST00000289448 COL11A2P13942 1736 aaPredicted RBP12.57□□□□□ -0.4
HMHB1-201ENST00000289448 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 NPHP1O15259 732 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 MYL6BP14649 208 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 PRKRIP1Q9H875 184 aaPredicted RBP12.56□□□□□ -0.4
HMHB1-201ENST00000289448 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 SBF1O95248 1867 aa12.56□□□□□ -0.4
HMHB1-201ENST00000289448 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
HMHB1-201ENST00000289448 HSPA6P17066 643 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 LMNB1P20700 586 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 PDIA6Q15084 440 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 TPTE2Q6XPS3 522 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 LRP10Q7Z4F1 713 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 MAP3K15Q6ZN16 1313 aa12.55□□□□□ -0.4
HMHB1-201ENST00000289448 LAMB4A4D0S4 1761 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 PRPF40BQ6NWY9 871 aaKnown RBP12.54□□□□□ -0.4
HMHB1-201ENST00000289448 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 CNKSR1Q969H4 720 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
HMHB1-201ENST00000289448 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 TOMM70O94826 608 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 ANXA1P04083 346 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
HMHB1-201ENST00000289448 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMHB1-201ENST00000289448 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
HMHB1-201ENST00000289448 CHL1O00533 1208 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 GPTP24298 496 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 KIF6Q6ZMV9 814 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
HMHB1-201ENST00000289448 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 PCNTO95613 3336 aa12.52□□□□□ -0.41
HMHB1-201ENST00000289448 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 NPR1P16066 1061 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
HMHB1-201ENST00000289448 GIGYF2Q6Y7W6 1299 aaKnown RBP12.5□□□□□ -0.41
HMHB1-201ENST00000289448 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
HMHB1-201ENST00000289448 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
HMHB1-201ENST00000289448 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
HMHB1-201ENST00000289448 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
HMHB1-201ENST00000289448 FER1L6Q2WGJ9 1857 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 POTECB2RU33 542 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
HMHB1-201ENST00000289448 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
HMHB1-201ENST00000289448 NUP98P52948 1817 aa12.48□□□□□ -0.41
HMHB1-201ENST00000289448 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
HMHB1-201ENST00000289448 NTSR2O95665 410 aa12.48□□□□□ -0.41
HMHB1-201ENST00000289448 COPS6Q7L5N1 327 aa12.48□□□□□ -0.41
HMHB1-201ENST00000289448 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
HMHB1-201ENST00000289448 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
HMHB1-201ENST00000289448 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
HMHB1-201ENST00000289448 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
HMHB1-201ENST00000289448 APAF1O14727 1248 aa12.47□□□□□ -0.41
HMHB1-201ENST00000289448 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
HMHB1-201ENST00000289448 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
HMHB1-201ENST00000289448 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
HMHB1-201ENST00000289448 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
HMHB1-201ENST00000289448 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
HMHB1-201ENST00000289448 APLP1P51693 650 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 HTRA3P83110 453 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMHB1-201ENST00000289448 FSTL1Q12841 308 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
HMHB1-201ENST00000289448 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms