RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 IFT57Q9NWB7 429 aa26.67■■□□□ 1.86
RAB28-201ENST00000288723 ZNF652Q9Y2D9 606 aa26.67■■□□□ 1.86
RAB28-201ENST00000288723 CALD1Q05682 793 aaKnown RBP26.67■■□□□ 1.86
RAB28-201ENST00000288723 PRR5LQ6MZQ0 368 aa26.66■■□□□ 1.86
RAB28-201ENST00000288723 SALL2Q9Y467 1007 aaPredicted RBP26.66■■□□□ 1.86
RAB28-201ENST00000288723 ERBB4Q15303 1308 aa26.66■■□□□ 1.86
RAB28-201ENST00000288723 GNAI1P63096 354 aa26.65■■□□□ 1.86
RAB28-201ENST00000288723 LRP10Q7Z4F1 713 aa26.65■■□□□ 1.86
RAB28-201ENST00000288723 ZBTB3Q9H5J0 574 aa26.65■■□□□ 1.86
RAB28-201ENST00000288723 NIP7Q9Y221 180 aaKnown RBP eCLIP26.65■■□□□ 1.86
RAB28-201ENST00000288723 KIF6Q6ZMV9 814 aa26.64■■□□□ 1.85
RAB28-201ENST00000288723 WWC1Q8IX03 1113 aa26.64■■□□□ 1.85
RAB28-201ENST00000288723 PIM2Q9P1W9 311 aa26.64■■□□□ 1.85
RAB28-201ENST00000288723 MAP3K15Q6ZN16 1313 aa26.64■■□□□ 1.85
RAB28-201ENST00000288723 FAM177BA6PVY3 158 aa26.63■■□□□ 1.85
RAB28-201ENST00000288723 NPHP1O15259 732 aa26.63■■□□□ 1.85
RAB28-201ENST00000288723 DUSP27Q5VZP5 1158 aa26.62■■□□□ 1.85
RAB28-201ENST00000288723 CNBD1Q8NA66 436 aa26.62■■□□□ 1.85
RAB28-201ENST00000288723 CHD4Q14839 1912 aa26.62■■□□□ 1.85
RAB28-201ENST00000288723 ELL2O00472 640 aaPredicted RBP26.62■■□□□ 1.85
RAB28-201ENST00000288723 CCDC27Q2M243 656 aa26.62■■□□□ 1.85
RAB28-201ENST00000288723 ERVV-1B6SEH8 477 aa26.61■■□□□ 1.85
RAB28-201ENST00000288723 HDGFL1Q5TGJ6 251 aa26.61■■□□□ 1.85
RAB28-201ENST00000288723 NBPF5PQ86XG9 351 aaPredicted RBP26.61■■□□□ 1.85
RAB28-201ENST00000288723 CHPF2Q9P2E5 772 aa26.6■■□□□ 1.85
RAB28-201ENST00000288723 RGL2O15211 777 aa26.6■■□□□ 1.85
RAB28-201ENST00000288723 AIMP1Q12904 312 aaKnown RBP26.6■■□□□ 1.85
RAB28-201ENST00000288723 C2CD5Q86YS7 1000 aa26.6■■□□□ 1.85
RAB28-201ENST00000288723 DALRD3Q5D0E6 543 aaKnown RBP26.59■■□□□ 1.85
RAB28-201ENST00000288723 TSR2Q969E8 191 aaKnown RBP26.59■■□□□ 1.85
RAB28-201ENST00000288723 BRIP1Q9BX63 1249 aa26.59■■□□□ 1.85
RAB28-201ENST00000288723 DDX21Q9NR30 783 aaKnown RBP eCLIP26.59■■□□□ 1.85
RAB28-201ENST00000288723 BRCA1P38398 1863 aaKnown RBP26.58■■□□□ 1.85
RAB28-201ENST00000288723 HOXB7P09629 217 aa26.58■■□□□ 1.85
RAB28-201ENST00000288723 COPS6Q7L5N1 327 aa26.58■■□□□ 1.85
RAB28-201ENST00000288723 GPTP24298 496 aa26.58■■□□□ 1.84
RAB28-201ENST00000288723 C8orf58Q8NAV2 365 aa26.58■■□□□ 1.84
RAB28-201ENST00000288723 XAGE3Q8WTP9 111 aa26.58■■□□□ 1.84
RAB28-201ENST00000288723 H0YIN7 160 aa26.57■■□□□ 1.84
RAB28-201ENST00000288723 ST5P78524 1137 aa26.57■■□□□ 1.84
RAB28-201ENST00000288723 ANKRD31Q8N7Z5 1873 aa26.56■■□□□ 1.84
RAB28-201ENST00000288723 PDE6BP35913 854 aa26.55■■□□□ 1.84
RAB28-201ENST00000288723 TPTE2Q6XPS3 522 aa26.55■■□□□ 1.84
RAB28-201ENST00000288723 ARHGAP27Q6ZUM4 889 aa26.55■■□□□ 1.84
RAB28-201ENST00000288723 GIGYF2Q6Y7W6 1299 aaKnown RBP26.55■■□□□ 1.84
RAB28-201ENST00000288723 NUP98P52948 1817 aa26.55■■□□□ 1.84
RAB28-201ENST00000288723 TSPYL6Q8N831 410 aa26.54■■□□□ 1.84
RAB28-201ENST00000288723 ZNF784Q8NCA9 323 aaPredicted RBP26.54■■□□□ 1.84
RAB28-201ENST00000288723 UBN2Q6ZU65 1347 aa26.53■■□□□ 1.84
RAB28-201ENST00000288723 NCBP3Q53F19 620 aaKnown RBP26.53■■□□□ 1.84
RAB28-201ENST00000288723 ZNF622Q969S3 477 aaKnown RBP eCLIP26.53■■□□□ 1.842e-6■□□□□ 10.3
RAB28-201ENST00000288723 DBF4Q9UBU7 674 aaPredicted RBP26.53■■□□□ 1.84
RAB28-201ENST00000288723 ATP10DQ9P241 1426 aa26.53■■□□□ 1.84
RAB28-201ENST00000288723 GTF2E1P29083 439 aaPredicted RBP26.52■■□□□ 1.84
RAB28-201ENST00000288723 NUTM1Q86Y26 1132 aa26.52■■□□□ 1.84
RAB28-201ENST00000288723 ZNF34Q8IZ26 560 aa26.52■■□□□ 1.84
RAB28-201ENST00000288723 TTLL6Q8N841 843 aa26.52■■□□□ 1.84
RAB28-201ENST00000288723 SUSD4Q5VX71 490 aa26.51■■□□□ 1.83
RAB28-201ENST00000288723 IL16Q14005 1332 aa26.49■■□□□ 1.83
RAB28-201ENST00000288723 SRGNP10124 158 aa26.49■■□□□ 1.83
RAB28-201ENST00000288723 HYPKQ9NX55 129 aa26.49■■□□□ 1.83
RAB28-201ENST00000288723 DLEC1Q9Y238 1755 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 COL11A2P13942 1736 aaPredicted RBP26.48■■□□□ 1.83
RAB28-201ENST00000288723 ARFGEF1Q9Y6D6 1849 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 ERFEQ4G0M1 354 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 WDR63Q8IWG1 891 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 NYXQ9GZU5 481 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 PDZRN3Q9UPQ7 1066 aa26.48■■□□□ 1.83
RAB28-201ENST00000288723 PHAXQ9H814 394 aaKnown RBP26.47■■□□□ 1.83
RAB28-201ENST00000288723 ZNF219Q9P2Y4 722 aaPredicted RBP26.47■■□□□ 1.83
RAB28-201ENST00000288723 ZNF428Q96B54 188 aa26.46■■□□□ 1.83
RAB28-201ENST00000288723 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
RAB28-201ENST00000288723 ABCC12Q96J65 1359 aa26.46■■□□□ 1.83
RAB28-201ENST00000288723 ANKRD13DQ6ZTN6 518 aa26.46■■□□□ 1.83
RAB28-201ENST00000288723 FANCIQ9NVI1 1328 aa26.45■■□□□ 1.83
RAB28-201ENST00000288723 TCERG1O14776 1098 aaKnown RBP26.45■■□□□ 1.82
RAB28-201ENST00000288723 NTSR2O95665 410 aa26.45■■□□□ 1.82
RAB28-201ENST00000288723 TCIRG1Q13488 830 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 PLBD2Q8NHP8 589 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 MASTLQ96GX5 879 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 KLRG2A4D1S0 409 aaPredicted RBP26.44■■□□□ 1.82
RAB28-201ENST00000288723 TWISTNBQ3B726 338 aaPredicted RBP26.44■■□□□ 1.82
RAB28-201ENST00000288723 PARP10Q53GL7 1025 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 CCDC30Q5VVM6 783 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 STYK1Q6J9G0 422 aa26.44■■□□□ 1.82
RAB28-201ENST00000288723 HSP90AB3PQ58FF7 597 aa26.43■■□□□ 1.82
RAB28-201ENST00000288723 PPP1R42Q7Z4L9 355 aa26.43■■□□□ 1.82
RAB28-201ENST00000288723 C21orf2O43822 256 aa26.42■■□□□ 1.82
RAB28-201ENST00000288723 CCER2I3L3R5 266 aa26.42■■□□□ 1.82
RAB28-201ENST00000288723 NLRP10Q86W26 655 aa26.42■■□□□ 1.82
RAB28-201ENST00000288723 CNKSR1Q969H4 720 aa26.42■■□□□ 1.82
RAB28-201ENST00000288723 UTP14AQ9BVJ6 771 aaKnown RBP26.42■■□□□ 1.82
RAB28-201ENST00000288723 RASSF7Q02833 373 aa26.41■■□□□ 1.82
RAB28-201ENST00000288723 PRPF40BQ6NWY9 871 aaKnown RBP26.41■■□□□ 1.82
RAB28-201ENST00000288723 IBTKQ9P2D0 1353 aaPredicted RBP26.41■■□□□ 1.82
RAB28-201ENST00000288723 NPR1P16066 1061 aa26.4■■□□□ 1.82
RAB28-201ENST00000288723 ADCY9O60503 1353 aa26.4■■□□□ 1.82
RAB28-201ENST00000288723 TNRC6CQ9HCJ0 1690 aaKnown RBP26.4■■□□□ 1.82
RAB28-201ENST00000288723 ATP5J2-PTCD1G3V325 749 aa26.39■■□□□ 1.82
RAB28-201ENST00000288723 C9orf131Q5VYM1 1079 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 1699.9 ms